Shewanella sp. WE21: CKQ84_16190 Help Entry CKQ84_16190       CDS       T05404                                  Name (GenBank) DNA-binding response regulator   KO K10126   two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD Organism shew  Shewanella sp. WE21 Pathway shew02020   Two-component system Brite KEGG Orthology (KO) [BR:shew00001]  09130 Environmental Information Processing   09132 Signal transduction    02020 Two-component system     CKQ84_16190  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    02022 Two-component system [BR:shew02022]     CKQ84_16190 Two-component system [BR:shew02022]  NtrC family   DctB-DctD (C4-dicarboxylate transport)    CKQ84_16190 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Sigma54_activat Response_reg Sigma54_activ_2 HTH_8 AAA_5 AAA_2 AAA_7 AAA_3 HTH_50 AAA AAA_16 FleQ HTH_28 ATPase Torsin Motif Other DBs NCBI-ProteinID:  AVI67303 LinkDB All DBs Position complement(3652332..3653711) Genome browser AA seq 459 aa AA seqDB search MSVPNSIQDYSVLIIDDEPHIGTVLVQLFELEGIKALATTEPKGIAKLLHKDWAGMVISD VNMPQLDGISLMQQIRLQDPDLPVVLLTGFGDIAMAVNALKQGAYDFLEKPFNNEHILDV VKRALEKRSLTLENRKLKKDLESQSVPGPRILGNSVGINRMRHIITQVIDTPADVLIEGE TGTGKELVARYLHDHSSRSQANFVAINCGAIPENLIESELFGAEAGAFTGVDKMRIGKFE YANGGTLFLDEIESTPLSLQVKLLRVLEDRKVERLGSNKSISLDIRVIAATKVDLKSLCD TGEFRQDLLYRLNLVTVPIPPLRDRREDIPLLFLHFARVASARYHKALIALNAEQNAILT SHDWPGNVRELRNLAERFVLLGGEAAFAGSLGNTPSLHSSMSLLQRVEFFERVLIEEALS HNKGSIKQTMEQLELPRKTLYDKMRKYDLDRKQYINSDD NT seq 1380 nt NT seq  +upstreamnt  +downstreamnt atgagtgtgcccaattcaattcaagattattctgttctcatcatcgacgatgagccgcac ataggcacagttctcgtgcaactatttgaactggagggcattaaggcgctcgccaccaca gaacccaaaggtatcgctaagttgctgcataaagattgggcgggaatggtgatatcggat gtcaacatgccacaattagacggcatcagcttaatgcaacaaatccgtctgcaagatccc gatctccccgtcgtcctactcactggttttggtgatattgccatggcagtcaatgcctta aaacaaggcgcctacgactttctcgaaaaaccctttaataacgaacatatactcgatgta gttaaacgcgccttagaaaaacgcagtctaaccttagagaaccgcaagcttaaaaaggat ctcgaaagccaaagcgtaccgggccctcgtattttgggcaacagtgtcggcatcaaccgt atgcgccacatcataacgcaagtaatagatacgcctgcggatgtgttaattgaaggcgaa acaggtacaggtaaagaacttgttgcccgctatttacacgaccacagcagccgcagccaa gccaactttgtcgccatcaactgtggtgcaatccccgaaaacttaattgaaagtgagctc tttggcgccgaagcgggggcctttactggcgtcgataagatgcgcattggtaagtttgaa tacgccaacggcggtacattatttttagatgaaattgaaagtacgccactgtcgctgcaa gtaaaactgctgcgggtacttgaagaccgtaaggttgaacgcttagggtcaaacaaaagc atcagccttgatatacgggtaatcgccgccactaaagtagatttaaagagcctgtgtgac accggggaattccgccaagacttgttgtatcgcttaaatctggtgactgtgcccatccct cccttgagagatcgccgtgaagatattccgttactctttttacactttgcccgcgtcgca tcggcacgctatcacaaagcacttatcgccttaaatgcggagcaaaacgcgatacttact tcccacgactggccaggcaatgtgcgtgagttacgtaatctagccgaacgctttgtgctg ctgggcggagaagctgcctttgccggctcgttaggcaatactccaagcctgcactcgagt atgtccctgctacaaagggtagagttttttgaacgggtactgattgaagaagcacttagc cacaacaagggcagtattaagcagaccatggagcagctagaactgccccgcaaaaccctc tacgacaaaatgcgtaaatacgatttagaccgcaaacagtacattaattccgatgactaa

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