Shewanella sp. WE21: CKQ84_16210
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Entry
CKQ84_16210 CDS
T05404
Name
(GenBank) C4-dicarboxylate ABC transporter
KO
K11688
TRAP-type transport system periplasmic protein
Organism
shew
Shewanella sp. WE21
Pathway
shew02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
shew00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CKQ84_16210
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shew02000
]
CKQ84_16210
Transporters [BR:
shew02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
CKQ84_16210
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctP
Motif
Other DBs
NCBI-ProteinID:
AVI67306
LinkDB
All DBs
Position
complement(3657755..3658774)
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AA seq
339 aa
AA seq
DB search
MILNQQTGLTRPLKTLVKMLAVASVFATSFNVFAEPIEIKFSHVVAENTPKGQMALKFKE
LVEQRLPGEYKVSVFPSSQLFGDNNELAALLLNDVQFVAPSLSKFERYTKRLQIFDLPFL
FNDMDAVNRFQQGEAGQTLLNSMNRKGIVGLGYLHNGMKQFSSNTPLNNPADAKGLKFRV
MASDVLAAQFDAIGAMAIKKPFSEVFTLLQTRAIDGQENTWSNTYSQKFYEVQSQITESN
HGVLDYMVVTSDTFWKGLPADKRKIIKEALDESIALGNKIAAEKDNEDKKLILDSKRSQL
VTLSPAERQKWVEVMKPVWAKFEDQIGKDVIDAAVAANK
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgatattgaatcaacaaactggattgacccgtccactcaaaaccttagtcaaaatgctc
gctgttgcctccgtatttgcgaccagttttaacgtatttgcagaaccgattgaaattaag
ttttcacacgtagtggcagaaaacacacctaaaggccaaatggcacttaaatttaaagaa
ctcgttgaacaacgtttaccaggtgaatacaaagtcagtgtatttcctagctcacagtta
tttggggataacaacgaactagcggcactgctgttaaacgacgtacaatttgtcgcgcct
tcactctcaaagtttgaacgttacactaaacgcctacaaatattcgatttaccattttta
ttcaatgatatggatgccgtgaaccgtttccaacaaggtgaagcaggtcaaacattactg
aactcaatgaaccgtaaagggattgtcggactgggttatttacacaatggtatgaaacag
ttctcctctaacacaccacttaacaatccagcagatgctaaaggcttaaaattccgcgta
atggcgtctgatgttttagcggctcagtttgatgccatcggtgcgatggctataaagaaa
ccgttctctgaagtctttaccctgctgcaaacccgcgctatcgatggtcaagaaaacact
tggtcaaatacttattcacaaaagttctatgaagtgcaaagccaaatcactgagagtaat
cacggtgttctcgactatatggtcgtgacctctgacactttctggaaaggtctaccagct
gacaaacgtaagatcatcaaagaagctttagacgaatctatcgcattaggtaacaagatt
gctgctgaaaaagacaatgaagacaaaaagttaatccttgattctaaacgttcacagtta
gtgaccctgtctcctgctgaacgtcaaaaatgggttgaggtaatgaaacctgtttgggct
aagtttgaagatcaaatcggtaaagatgtgattgatgctgctgttgctgcaaataaataa
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