Shewanella sp. WE21: CKQ84_16470
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Entry
CKQ84_16470 CDS
T05404
Name
(GenBank) hypothetical protein
KO
K07114
Ca-activated chloride channel homolog
Organism
shew
Shewanella sp. WE21
Brite
KEGG Orthology (KO) [BR:
shew00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shew02000
]
CKQ84_16470
Transporters [BR:
shew02000
]
Other transporters
Pores ion channels [TC:
1
]
CKQ84_16470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA_2
TPR_2
TPR_1
TPR_16
TPR_14
TPR_11
TPR_8
TPR_6
TPR_12
Motif
Other DBs
NCBI-ProteinID:
AVI67341
LinkDB
All DBs
Position
complement(3702530..3704566)
Genome browser
AA seq
678 aa
AA seq
DB search
MSLHFIRPEWLLALVPLALALLSLWRQHESHSAWNRYIAPHLAKILVTQGNKKSRRPLHL
LALTWLIATLALAGPAVNKQSLPVFAAEQGRVLVMDMSVSMFATDLAPNRLTQAKFRATD
LLRNLKEGETGLVAFAGDAFTISPLTRDTGTLLNLLPTLSPEIMPVRGSNLAAGLTQAKT
LLAQGGHIRGDIILMTDGITTAQFDEANSALNGTQYRLAVVAFGTSQGAPIRLPDGQLQR
DSSNEVVVARTDFALLQKLAVNNKGVLIQNRTDGNDLAQLQQWLSDAGDAKATDLDGETW
QDLGPYLALLLLLPALFSFRQGIVASVGFVTLAGSLLLAAVPQPAHASVWDNAWDNVWKT
TDQQAMQAYQSQDYANAAKQFESPQWRGSAQYKAGDFAQALKTFEQDSSAHGLYNQGNAL
MQLGKPDKAKERYQAALEKQADFPAAKANLELAEKLLQEQQQQQGKNEQQDKNQDQQGDQ
QSGDPKSGDQQSGDQQSGDQKSQDKQQSDQDSAQKNKQDQAGQEPQDQQDNADADQSPEQ
QKTDEQQSEQDKQNGNAQDKQNEAQQENEPVDNSPVENEAKMQAQAKADAEEQKSAEQEK
QSVAAKEAPEQNTQDKQEAAMSESVEAPPTNSEPLPAEMQRALRGVSEDPQVLLRNKMQL
EYQKRRQNGQISKDNEQW
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgagcctacattttattcgtcccgaatggctactcgccctagtgccgctagccttagcc
ttgttgagtttatggcggcaacacgaaagccacagcgcgtggaaccgttatattgcgccg
cacttagccaagatattggtcacccaaggcaataagaaatcccgccgtccgttacattta
ttagccttaacttggttgattgcgaccttggcactcgccggacctgccgtgaataaacaa
tccttacctgtgtttgccgccgagcaaggccgcgtactggtgatggacatgtccgtatct
atgttcgccaccgatcttgccccgaatcggttaacccaagctaaatttagggcaacggat
ctcctgcgtaatcttaaagaaggtgaaacaggtttagtcgcctttgccggcgatgccttt
actatcagcccattaacccgtgataccggcacattactcaatttactgccgacgttaagt
cctgagatcatgcccgttcgtggttcaaacttagcggcaggcttgacccaagccaaaacg
ctactggctcagggtggccatattcgcggtgatattatcctgatgacagatggcatcaca
acagcccagtttgatgaggctaactcggcattaaatggcacccaatatcgcctcgccgtc
gtcgcttttggcaccagccaaggtgcgccaatccgtctacccgatggacaattacaacgc
gacagtagcaacgaagtcgttgtggcccgcactgatttcgctctgctgcaaaaactggcc
gtgaataacaaaggcgttctgatccagaatcgcaccgacggtaatgatctcgcccaatta
cagcaatggttaagcgatgctggcgatgcgaaagccacagatcttgatggtgaaacttgg
caggatctcggtccttacctcgccttattattactgctacccgcccttttcagctttaga
caaggaatcgtggccagtgttggatttgtcactcttgctggcagcttactgctcgcggct
gtgcctcagccagcccatgccagtgtgtgggacaatgcctgggataatgtgtggaaaacc
acagatcaacaagcgatgcaggcctatcaatcccaagattacgcaaacgccgctaagcag
tttgagtcgccccaatggcgtggcagcgcccaatataaagctggtgattttgcgcaagca
ctgaaaaccttcgagcaagatagttcagcccatggcctctacaatcaaggcaatgcgttg
atgcaactcggtaaacccgataaggccaaggagcgctatcaagccgcgcttgagaaacaa
gctgatttccctgcggccaaggccaaccttgaacttgctgaaaagttattgcaggaacag
caacaacagcaaggtaaaaacgagcaacaggataagaaccaagatcaacaaggcgatcag
cagtccggtgatcccaaatcaggtgatcagcagtctggcgaccaacaatccggtgaccaa
aaatcgcaggataaacagcaatcagaccaagatagcgctcagaaaaataaacaagatcaa
gcagggcaagagcctcaggatcaacaggacaatgccgacgcggatcaaagccctgaacag
caaaaaacggatgagcaacaatctgagcaagataagcaaaatggcaatgctcaggacaag
cagaatgaagctcagcaggaaaatgagccggtagacaattcacctgtagaaaatgaagct
aagatgcaagcgcaggctaaagccgatgctgaagagcaaaagtcagctgaacaagaaaag
caaagcgttgccgccaaagaagctccagagcaaaatacgcaagataaacaagaggctgct
atgagtgaatcggtcgaggcaccgccaaccaatagcgagccactgcccgcagaaatgcaa
cgagcactgaggggcgtgagtgaagacccgcaagtgttactgcgcaacaagatgcagttg
gaatatcaaaaacgccgtcaaaatggccaaatatcaaaggataacgaacagtggtga
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