Shewanella sp. WE21: CKQ84_16500
Help
Entry
CKQ84_16500 CDS
T05404
Symbol
fadJ
Name
(GenBank) fatty acid oxidation complex subunit alpha FadJ
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
shew
Shewanella sp. WE21
Pathway
shew00071
Fatty acid degradation
shew00280
Valine, leucine and isoleucine degradation
shew00310
Lysine degradation
shew00362
Benzoate degradation
shew00380
Tryptophan metabolism
shew00410
beta-Alanine metabolism
shew00640
Propanoate metabolism
shew00650
Butanoate metabolism
shew00907
Pinene, camphor and geraniol degradation
shew00930
Caprolactam degradation
shew01100
Metabolic pathways
shew01110
Biosynthesis of secondary metabolites
shew01120
Microbial metabolism in diverse environments
shew01200
Carbon metabolism
shew01212
Fatty acid metabolism
Module
shew_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
shew00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
CKQ84_16500 (fadJ)
00650 Butanoate metabolism
CKQ84_16500 (fadJ)
09103 Lipid metabolism
00071 Fatty acid degradation
CKQ84_16500 (fadJ)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
CKQ84_16500 (fadJ)
00310 Lysine degradation
CKQ84_16500 (fadJ)
00380 Tryptophan metabolism
CKQ84_16500 (fadJ)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
CKQ84_16500 (fadJ)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
CKQ84_16500 (fadJ)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
CKQ84_16500 (fadJ)
00930 Caprolactam degradation
CKQ84_16500 (fadJ)
Enzymes [BR:
shew01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
CKQ84_16500 (fadJ)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
CKQ84_16500 (fadJ)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
CKQ84_16500 (fadJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
LSDAT_euk
LEM
Motif
Other DBs
NCBI-ProteinID:
AVI67347
LinkDB
All DBs
Position
3709739..3711859
Genome browser
AA seq
706 aa
AA seq
DB search
MEKTFNLTRRDDGIAILTMDVPGETMNTLKAQFGPEISEILAEIKSDPHIRGLVLISGKK
DSFVAGADISMLDACKTAADAKALSQQGHVVFNELEALKIPVVAAIHGACLGGGLELALA
CHQRVCSDDGKTMLGVPEVQLGLLPGGGGTQRLPRLVGITTALDMMLTGKQIRPKQALKM
GLVNDVVPQTILLQTAVEMALAGKRAPKPIKKSLVNQVLEGTSFGRNIIFDQATKQVEKK
TQGNYPAPAKIIDCVRQGIAKGMQKGLEVEASHFAELVVSKESEALRSIFFATTEMKKET
GAEGATPRKVKKAVILGGGLMGGGIASVTTTKAKIPVRVKDISEKGLSNALAYAYKLLDK
GVKRRHMTPAARDNLMALMTTTTEYKGVKDADIVVEAVFEDLALKHQMVKDIERECGEHT
IFASNTSSLPISQIAEAATRPENVIGLHYFSPVEKMPLVEVIAHAKTSPETIATTVAFAR
KQGKTPIVVQDGAGFYVNRILALYMNEAAQLLLEGQSVEHLDKALVKFGFPVGPITLLDE
VGIDVGAKISPILEKELGERFKAPAAFDKLLGDDRKGRKNGKGFYQYGASSKKAKAVDES
VYGVLGIKPGTNKDAKAVAERCVVQMLNEAVRCLDDGIIASPRDGDIGAIFGIGFPPFLG
GPFHYIDTLGAANLVKILEGYQSQFGNRFEPCERLKTMVQENARFF
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagacctttaatttaacccgccgcgacgacggcattgccattttgactatggat
gttcctggcgaaaccatgaacaccctaaaagcacagtttggccctgaaatcagtgagatt
ctggctgagattaaaagcgatcctcatattcgtggactcgtgctgatctcgggcaagaaa
gattctttcgttgcgggcgcggacatttctatgctcgatgcctgtaaaacggcggccgat
gccaaagccttatcccagcaagggcatgtggtttttaatgagttagaagccttaaaaatt
cctgtagtggcggcaatccatggtgcctgtttaggtggtggtttagagttagccttagcc
tgccatcaaagggtatgtagcgacgatggtaaaaccatgctcggcgtaccggaagttcaa
cttggcttattacctggcggcggtgggactcaacgtttgcctcgtttagtcggtattacc
accgccttagacatgatgttgaccggtaaacaaatccgtcctaaacaagccttgaaaatg
ggcttagtgaatgatgttgtaccgcagaccattttgctgcaaaccgccgttgagatggcg
cttgcgggtaaacgtgcaccgaaaccaattaaaaagtcactcgttaatcaagtgcttgaa
ggcacgagctttggccgtaacattatttttgatcaagcgactaaacaagtcgaaaagaaa
acccaaggtaattatccagcaccagccaagattattgactgcgtgcgtcaagggattgcg
aaggggatgcaaaaagggctagaagtcgaagcgagtcactttgccgaattagtggtatca
aaagaatctgaagcgctgcgcagtattttcttcgccaccactgaaatgaagaaagaaacc
ggcgctgagggtgctacaccgcgcaaagtgaagaaagcggtgatcttaggtggcggttta
atgggcggaggcattgcctctgtgacgactactaaggctaaaatccccgttcgcgtcaaa
gacatcagcgaaaaaggtttaagcaatgcattagcctacgcttataagttgttggataaa
ggggtaaagcgccgccatatgacgcctgctgcccgtgacaacttaatggcactgatgact
acaaccactgagtataaaggcgttaaagatgccgacatcgttgtggaagcggtatttgaa
gacttagcgcttaagcatcaaatggtgaaagacattgagcgtgagtgtggtgagcacact
atttttgcgtcaaacacctcatctttgcctattagccaaatcgctgaagcggcgacgcgt
cctgaaaatgtgattggtctgcattatttctcgccagtagagaaaatgccgctggtggaa
gtgattgcccacgctaaaacgtcgccagaaaccattgcgactactgtcgcatttgcccgt
aagcaaggtaaaacaccgatagtggtacaggatggcgcgggtttctacgtgaaccgtatt
ctggctctgtatatgaatgaggccgcgcaattactactcgaaggccaaagtgttgagcat
ttggataaagccttagtgaaatttggcttccctgtgggacctattactttactcgacgaa
gtgggtatcgacgtgggcgcaaaaatttcaccgatccttgagaaagaattgggtgaacgt
tttaaagcgccagcggcttttgacaagcttttgggtgacgatcgtaaaggccgtaaaaat
ggcaaaggtttctatcaatacggcgcatcgagcaagaaagctaaagctgtcgatgaaagt
gtttatggcgtgttaggtattaagcctggcaccaataaagacgcaaaagcggttgctgag
cgttgtgtcgtacaaatgctcaatgaagcggtgcgttgtttagatgatggtattatcgca
tcgccaagagacggtgatattggcgctattttcggtattggcttcccgccattcctcggt
ggcccattccattatattgacactttaggcgccgcgaacttagtgaagatccttgaaggt
tatcaaagtcaattcggtaacagattcgaaccttgtgagcgcttaaaaaccatggttcaa
gaaaacgcgcgtttcttctaa
DBGET
integrated database retrieval system
