Shewanella sp. WE21: CKQ84_16595
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Entry
CKQ84_16595 CDS
T05404
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
shew
Shewanella sp. WE21
Brite
KEGG Orthology (KO) [BR:
shew00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
shew03016
]
CKQ84_16595
Enzymes [BR:
shew01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
CKQ84_16595
Transfer RNA biogenesis [BR:
shew03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CKQ84_16595
Prokaryotic type
CKQ84_16595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
AVI67366
LinkDB
All DBs
Position
3737342..3738127
Genome browser
AA seq
261 aa
AA seq
DB search
MRIALGIEYDGNGYFGWQRQAEVDSVQGQLERALSIVANEPIGVFCAGRTDAGVHATGQV
VHFETNAIRNEGAWTLGVNANLPDNIAVRWVKEVDDSFHARFSATARRYRYVIYNHTFRP
GILRHGVSHYHGNIDADKMHQAAQALLGEQDFTSFRAVQCQSKTPFRNVHCVNVTRQGMY
VIVDIAANAFLHHMVRNIVGSLLEIGLGNQPLTWMGDLLALKDRNQAAATAKPHGLYLVD
VTYPEQYQLPKLALGPLFMLD
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgcggattgcattaggtattgaatatgacggtaatggttattttggctggcaacgtcag
gccgaagtcgattcagtacaagggcaattagaacgggcgttatcgatagtggctaatgag
cctatcggcgtcttctgcgctggacgtaccgatgcgggcgtgcatgccacaggccaagtg
gttcattttgaaaccaatgccattcgtaatgaaggtgcatggaccttaggggtgaatgct
aatttgcccgacaatattgccgtacgttgggtcaaagaagtcgacgacagtttccatgcg
cgcttttcggccaccgccagacgctaccgctatgtgatttataatcacacttttcgccct
gggattttacgccatggtgtaagccattatcacggcaatatcgatgctgacaaaatgcac
caagcggcacaggcactcttgggtgagcaggattttactagctttcgcgctgttcagtgt
cagtcgaaaacaccgtttcgtaatgtgcattgcgttaatgtcacgcgccaaggtatgtat
gtgattgttgatatcgccgcgaatgctttcttgcatcacatggtgcgcaatattgtcggt
tcattgttagaaatcggtctaggtaatcagccactgacttggatgggcgatttgctcgcg
ttaaaagacagaaaccaagccgcagcaacggctaaaccccatggactctatttagttgat
gtgacttatccagaacaatatcaattacctaagctcgcccttgggccattattcatgttg
gattga
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