Shewanella sp. WE21: CKQ84_16795
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Entry
CKQ84_16795 CDS
T05404
Name
(GenBank) 23S rRNA pseudouridine(2605) synthase RluB
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
shew
Shewanella sp. WE21
Brite
KEGG Orthology (KO) [BR:
shew00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
shew03009
]
CKQ84_16795
Enzymes [BR:
shew01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
CKQ84_16795
Ribosome biogenesis [BR:
shew03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CKQ84_16795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
HEAT_EZ
NfeD
Motif
Other DBs
NCBI-ProteinID:
AVI67403
LinkDB
All DBs
Position
3782338..3783213
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AA seq
291 aa
AA seq
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MSEKLQKVLARAGHGSRREMEAWIAAGRVSIDGEIASLGDRIEADAKVRIDGRAISLKSA
EDVICRVLAYHKPEGEICSRKDPEGRPTVFDRLPKVRDSRWVAVGRLDINTSGLLLFTSD
GELANRLMHPSNEVDREYAVRTFGEIPEATVQRLRTGVMLEDGPAQFDSIKPAGGEGMNQ
WWHVCLREGRNREVRRLWESQEVQVSRLIRIRYGMVELPKSLPRGGWVELPVEQVNYLRK
LAGLEPETRTMLAADKHSVARAQVKSAKIRRAVRKHKVTGSGKPKPSRQRS
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaaagttgcagaaagtcttggcccgtgcaggccatggctcccgtcgtgagatg
gaggcatggattgctgcaggccgagttagtattgatggtgaaattgctagccttggggat
cgtattgaagctgatgctaaagtacgtatcgatggcagagccatttcgttaaagtctgcc
gaagacgtgatttgccgtgtgctggcatatcataaacctgaaggcgaaatttgcagtcgt
aaagatcctgaaggccgtccaacggtattcgatcgcttacctaaagtgcgtgattcacgc
tgggtagcggttggtcgtttagacattaacacctcaggcttattgttgtttacgtcagat
ggtgagttggcgaaccgtttaatgcatccatcgaacgaagtcgaccgcgaatacgcagtg
cgtacctttggtgaaatccctgaggcgacagtgcaacgtttacgtactggcgtcatgtta
gaagacggccctgcgcagtttgatagcatcaaaccagcgggcggcgaaggcatgaaccag
tggtggcatgtgtgtttacgcgaaggtcgcaaccgtgaagtgcgccgtttgtgggaatcc
caagaagtgcaagtgagccgtttgatccgtattcgttatggtatggtcgaactgccaaaa
tcactgcctcgcggtggctgggttgaattgcccgtagagcaagttaactacttgcgtaag
ctggcgggtcttgagcccgaaactcgtactatgcttgctgccgataaacacagcgtagcc
cgtgctcaggtgaagagtgctaaaattcgccgcgccgtacgtaagcataaagtgaccgga
tcgggaaaacctaagccatcgcgtcagcgcagctaa
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