Shewanella sp. WE21: CKQ84_17025
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Entry
CKQ84_17025 CDS
T05404
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
shew
Shewanella sp. WE21
Brite
KEGG Orthology (KO) [BR:
shew00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
shew03036
]
CKQ84_17025
Chromosome and associated proteins [BR:
shew03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
CKQ84_17025
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_21
AAA_15
AAA_29
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
AVI68736
UniProt:
A0A2R3F336
LinkDB
All DBs
Position
3836921..3840337
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AA seq
1138 aa
AA seq
DB search
MRLKQIKLAGFKSFVDPTKIPFLQALTAIIGPNGCGKSNVIDAVRWVLGESSAKHLRGDS
MADVIFNGSSARKPVSVAGVELIFENKEGRLAGQYASYEEIVVKRQVSRDGESWYFLNGQ
KCRRKDITDLFMGTGLGPRSYAIIEQGTISRLIESKPQDLRTFIEEAAGISRYKERRRET
ENRIRHTRENLERLGDIRSELGKQLDKLAQQAKAAKQYRELKQAERKTHAELLVMRYQEL
QAQMASLSEQISAIEVQQAAAQSLAQTDELQTTELQVQLAQLAEQEQRAVEAYYLTGTEV
AKLEQQLQNQKQRDAQLETQLAQVKEQIQQNTDKLNGYKASLSALELELAKLGPQHDEQQ
EIMDELQSQWEMSIERSQQQAEVARQQAADVSQHKLQLELRRSQLVHQQQLLQHKQQQSR
EQQAQLSALMDGDLASSITPLQQDIESLDDALTLQNEINHQQEQSVSASTQALDEARHSA
EHIQQQLTATKARHELVEQWLTKQEQQSDKPQLWQSLTVENGWETAAELALNGLLTLPVG
VTETEMGFQALASQSSQSEFLQAKVNLVPWLAGLKWAKDIHAAKELLPQLTSDQRIVTAD
GYLLGQGFLITKTEGAQSLVQLSKEQAQLAQNILDLQQSLQIRQDKMTDLAAILQQQRLQ
LTDGAQKLHQLQLDKATKSMQLSGLIEQVKARVEQQSKLDAALSTSLIDIERLSEQCELL
AEQEMELDETLQASEDIQRQLIQDTQADSVRHQALKGRITEVERQLSATATGLQAVTMRM
AVSTEQIELQQVRVNELIHSRESVLTELAKVAQLSGVQNSVQLTEQLTQLLKQQHEQQQG
LKEVRQQQSVLTDTLNRIGIKQKQELGKLEDLTQSLSTLKLRREGIKGQANSQLEALQEQ
QIILSEILGNLPAEGMPDKWQSDLDQIRQKIVRLGAINLAAIEEFEQQSERKSYLDHQDD
DLNKGLATLEEAIRKIDKETRSRFKTTFDSVNEDLGRLFPKVFGGGRAYLALTDDDLLET
GVTIMAQPPGKKNSTIHLLSGGEKALTALSLVFAIFRLNPAPFCMLDEVDAPLDDANVER
FCRLLKEMSQSVQFIYISHNKITMEMADQLIGVTMHEPGVSRIVAVDIEQAVAMADAG
NT seq
3417 nt
NT seq
+upstream
nt +downstream
nt
atgagattaaaacagataaaacttgccggctttaagtcgtttgtcgatcctacgaaaatt
ccttttttacaggcattaaccgccattattggcccaaatggctgtggtaaatcgaacgtg
atcgatgccgtgcgttgggtgctcggtgaaagctcggcgaagcacctacgcggtgattct
atggccgatgtgatatttaacggttcaagcgcgcgaaaacctgtgtctgtggcgggtgtt
gaacttatttttgaaaacaaagaaggtcgcctcgcgggtcagtatgccagttatgaagaa
atcgtcgttaagcgtcaggtgagccgcgacggtgagtcttggtattttctcaatggtcaa
aagtgtcgtcgtaaagacattaccgacttgtttatgggcacaggtcttggcccgcgaagt
tatgccattatcgagcaaggcactatttcccgcctgattgaatctaaaccccaagacttg
cgcacctttattgaggaagccgctgggatttcccgctataaagagcgtcggcgcgaaact
gaaaaccgtattcgccatacccgcgaaaacctcgagcgtttgggcgatattcgcagtgaa
ctcggtaagcagttagataaactcgcgcagcaggctaaagccgctaaacaatatcgtgag
cttaaacaggccgagcgtaagacccatgctgaactccttgtgatgcgctatcaagagttg
caagctcagatggcgagcctatctgagcagataagtgctattgaagtgcagcaagcggcg
gcgcagtcactcgcgcaaaccgatgaattacaaaccactgaattgcaagtacaactcgca
caactggcggagcaagagcagcgagcggttgaagcctattatctgactggtactgaagtc
gctaagttagagcaacagctacagaatcaaaagcagcgcgacgcccagctcgaaacccag
ttggcgcaagtcaaagagcagatccaacaaaacaccgataagcttaacggttataaagcg
agtcttagcgcgttagagcttgagcttgccaaacttgggccacagcatgatgagcaacaa
gagatcatggatgagctgcaatcccaatgggaaatgagcattgaacgcagtcagcagcag
gccgaagtggcgcgccaacaggcagcggatgtttctcagcataagttacagcttgaactg
cgtcgcagccagttagtgcatcagcagcaattactgcaacacaaacagcagcaaagtcgt
gagcagcaggcgcaactttcggcgttaatggacggtgatctcgcatcgagtattacacca
ttgcagcaagatattgagtctttggatgatgcgctcacactgcaaaatgaaattaatcat
cagcaagaacaaagtgtaagtgcaagtacgcaagccttagatgaagcccgtcatagcgct
gagcacattcagcagcaattaaccgcgactaaagcgcgccatgagctggttgaacagtgg
ttgactaagcaagaacagcagagtgataaaccgcagttatggcagagtttaaccgttgaa
aatggttgggaaacagcggcggaactcgccctaaatggcttgttgaccttgcccgttggc
gtcactgaaactgaaatggggtttcaagcgttagcgtcacaatcaagccaaagtgaattt
ttacaggctaaggtgaatctcgtcccttggttagcggggcttaagtgggcaaaggatatc
catgcagcgaaagaactgctgccacagctaacatcagatcaacggattgtcactgccgac
ggttatctactgggacaaggttttttaatcactaaaacagagggcgcccagtcactggtg
caactcagtaaagagcaagctcagttagcgcaaaatatcctcgatttgcaacaatccctg
cagattcggcaagacaagatgacagatcttgcggctattttgcagcaacaaagactgcaa
ctgaccgatggcgcgcaaaaattacatcaattgcagttagacaaagcgactaagtcgatg
cagcttagtggtttaatcgagcaagtgaaggcgcgcgtcgaacagcaaagtaaactcgac
gcggctttaagtacgagtttgattgatattgaacgcttaagcgagcaatgcgaattatta
gcagaacaagaaatggagctcgatgagacgctgcaggctagtgaagatattcagcggcaa
ctcatccaagacacacaggccgatagtgtgcgccatcaagcattaaaagggcgtattact
gaggtagaacgtcaattatcagccactgcgacgggtttgcaagccgtgactatgcgcatg
gccgtgagcacggagcaaattgaattacagcaagtgcgtgtcaatgaactcatccactcc
cgcgagtctgtgttaacagaacttgccaaagttgcccaattgagtggggtgcaaaatagt
gtgcagttgactgaacagttaacgcagttactaaagcaacaacatgagcaacaacagggc
ttaaaagaggttcgtcagcagcaaagtgtgctcacagacacattaaaccgtataggaata
aagcaaaaacaagagcttggtaagcttgaggacttgactcaaagcctgagcacgttaaag
ttacgtcgtgaaggaataaaaggccaagcgaatagtcagctggaagccttacaggaacag
caaatcattctgtctgaaatccttggaaacttgcccgcagaggggatgccagacaagtgg
caaagtgatttagatcaaatacggcagaaaattgttcgtttaggtgccattaaccttgcg
gcgatcgaagaatttgaacagcaaagtgagcgaaaatcttatcttgatcatcaagatgac
gatttaaataaagggcttgcaaccttagaggaagcgatccgtaaaatagataaggaaacc
cgaagccgctttaagacgacatttgactcagtcaacgaagatctcggacgcttatttccg
aaagtgttcggtggcggccgagcttatttagcgttaactgacgacgatttgctagaaacg
ggcgtgactatcatggcccaaccaccggggaagaagaacagcacaatccatcttctttcg
ggtggtgaaaaagcattaaccgctttatcattggtattcgccatttttaggctgaatcct
gctcccttctgtatgttagatgaagtggatgcgccattagacgatgccaacgtagaacgc
ttctgtcgattgctaaaagaaatgtcacagagcgtacagtttatttatatcagccataac
aaaataaccatggaaatggcggatcaacttattggcgtgactatgcacgagcccggtgtg
tctcgtatagttgcggtagacatagagcaagcggtggcgatggctgacgctggataa
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