Shewanella sp. WE21: CKQ84_17130
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Entry
CKQ84_17130 CDS
T05404
Symbol
cpdB
Name
(GenBank) 2',3'-cyclic-nucleotide 2'-phosphodiesterase
KO
K01119
2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:
3.1.4.16
3.1.3.6
]
Organism
shew
Shewanella sp. WE21
Pathway
shew00230
Purine metabolism
shew00240
Pyrimidine metabolism
shew01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
shew00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
CKQ84_17130 (cpdB)
00240 Pyrimidine metabolism
CKQ84_17130 (cpdB)
Enzymes [BR:
shew01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.6 3'-nucleotidase
CKQ84_17130 (cpdB)
3.1.4 Phosphoric-diester hydrolases
3.1.4.16 2',3'-cyclic-nucleotide 2'-phosphodiesterase
CKQ84_17130 (cpdB)
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Gene cluster
GFIT
Motif
Pfam:
5_nucleotid_C
Metallophos
Motif
Other DBs
NCBI-ProteinID:
AVI67455
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All DBs
Position
complement(3863895..3865940)
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AA seq
681 aa
AA seq
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MLNKKILAVMITAALGVSACNSDDDKVVQADLRVLETTDLHTNIMDFNYYSGKNDPTIGL
ARTASLIHAARNEAKNSVLVDNGDLLQGSPMGDYMAKVGLQMGDIHPAYKAMNLLDYEVG
NIGNHEFNYGLDFLNKSISGADFPYINSNVYCADDNGCWNEVKKGEHLFTPYIIKQKNII
DSEGNNQTINIGYIGFVPPQILLWDKQNLTGKVTVEDIIETAKKYVPEMKAKGADIIIAI
PHSGIGSTENPGDPMAENATYALTYVDGINAILFGHSHSIFPDAKYADLPNTDVTKGLLN
GVPAVMPGRWGDNLGVVDFKLERRDGKWHVLSAKTQARPIYNGATKEELVSQDPAIKDAV
AAEHQGTLAFVDEPIGVAAADMYSFLTLVQDDPTVQIVSDAQIANVKAKLPAALKGLPVL
SASAPFKAGGRHGTTSDADQFVQVDKGPLTFKNAADLYLYPNTMVAVKATGAELKDWLEC
SANQFNQIDPAKTTPQSLINWDGHPTYNFDVLDGLTYKIDVTQPSKFDRDCAVVNASANR
IVDLSYKDENGKVMTGEEFAAKEFIVTSNNYRAFGGKFAGTGSDHVVLELPDTNREALAA
YITAQSQYNETTGKYEAMVNPSADYNWDFKTITTNVALDVRFETQDSDKAAAFIEANKQR
EMKKISKDELGFAVYSINLTK
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgttaaataagaaaatactcgcagtgatgatcactgccgcccttggtgtaagcgcctgt
aattctgatgacgacaaagtcgttcaagccgatttacgggtactcgaaaccacagatctg
cacacaaatatcatggatttcaactactacagtggcaaaaatgacccaactatcggtcta
gcccgtactgcaagcttaatccacgctgcacgcaacgaagccaaaaacagcgtactcgtc
gacaacggcgatctactacaaggcagcccaatgggcgattacatggctaaagttggcctg
caaatgggtgatattcatccagcctataaagccatgaacctattagattatgaagtcggt
aatatcggtaaccatgaatttaactatggtttagatttcttaaataaatctattagtggt
gcagatttcccttatatcaactcaaacgtttattgcgccgacgataatggttgctggaat
gaggttaaaaaaggtgagcatttattcaccccttatatcatcaaacaaaaaaacatcatc
gacagtgaaggtaataatcaaaccattaacattggttatattggttttgtgccaccgcaa
attctattgtgggataaacaaaatctgacgggtaaagtgacggtcgaagatattattgaa
accgcgaaaaaatatgtcccagaaatgaaagccaaaggggccgatatcattatcgccatt
cctcactctggcattggttcaacggaaaatcctggcgatcctatggctgaaaatgccact
tacgctttgacttatgttgatggtatcaatgcgattctattcggccacagccactctatc
ttccctgatgctaagtatgccgacttacccaataccgacgtcactaaaggcctactgaac
ggcgtccccgcagtgatgccaggtcgttggggtgataacttaggggttgttgactttaaa
cttgaacgtagagatggtaaatggcatgtccttagtgcgaaaacgcaagctcgccccata
tataatggtgcgactaaggaagagttagttagccaagatcccgcaattaaagatgcagtc
gcagccgagcaccaaggaaccctcgcctttgtggatgaacctatcggcgttgccgcagcc
gacatgtacagcttccttaccttagtgcaggacgaccctacggtacaaatcgtttccgat
gcgcaaatcgctaacgtgaaagcgaaattacctgcagcattaaaaggtctgccagtgcta
tcagcctccgcaccctttaaagcgggcggtcgccacggtacaaccagtgatgccgatcaa
tttgtgcaagttgataaaggcccactgacctttaaaaacgccgccgatctgtacctgtat
cccaatactatggtggcagtcaaagcgacgggcgccgaattgaaagattggctagagtgc
tcagcaaaccagttcaatcaaatcgacccagcaaaaaccaccccacaaagtttaatcaac
tgggatggtcatccaacctataacttcgacgtactcgatgggttaacctataaaattgat
gtgacccaaccaagcaagtttgaccgcgattgcgccgtcgttaatgccagcgcaaaccgt
atcgttgatttaagctataaagacgaaaacggcaaagtcatgacaggtgaagaatttgcc
gcgaaagaatttatcgtcacctcaaataactaccgcgcctttgggggtaagtttgctggt
acgggtagcgaccatgtggtgcttgaactgcccgatactaaccgtgaagcactagctgcc
tatatcacagcgcaatctcagtacaacgaaaccacaggtaagtacgaagctatggtcaat
ccaagtgccgattacaactgggatttcaaaaccatcaccacgaatgtcgcattggacgtt
cgcttcgaaacccaagacagtgacaaagccgctgcctttatcgaagccaataaacaacgt
gaaatgaagaagataagcaaggatgaactgggtttcgccgtttatagcatcaacctaacc
aaataa
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