Shewanella sp. WE21: CKQ84_17175
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Entry
CKQ84_17175 CDS
T05404
Name
(GenBank) hypothetical protein
KO
K07677
two-component system, NarL family, capsular synthesis sensor histidine kinase RcsC [EC:
2.7.13.3
]
Organism
shew
Shewanella sp. WE21
Pathway
shew02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
shew00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CKQ84_17175
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
shew01001
]
CKQ84_17175
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
shew02022
]
CKQ84_17175
Enzymes [BR:
shew01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
CKQ84_17175
Protein kinases [BR:
shew01001
]
Histidine kinases
NarL family
CKQ84_17175
Two-component system [BR:
shew02022
]
NarL family
RcsC-RcsD-RcsB (capsule synthesis)
CKQ84_17175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c
Response_reg
HisKA
dCache_1
Motif
Other DBs
NCBI-ProteinID:
AVI67464
UniProt:
A0A2R3EZL3
LinkDB
All DBs
Position
3877129..3880560
Genome browser
AA seq
1143 aa
AA seq
DB search
MKSSQFNLRNLLCKYLKCTPLSDPDLPGRYSRWLLFSGGLAISLIVLTISVVEITILSER
FLDERVHLFQIQRGIIKENLDRTQARLKQRVEFYEMLWRLRDGENLPVLRYRQELLKKNG
VIVTDTDVTATPAMILSSSSHIVTEHELADFLGLMREVSPTPLLRQRENGHYLGGYIYSS
DHRLLALWPPLALTKLNNVKEVGINKFINDAVTRVDAVIATTNVNKLYDERMFWVPFYKS
PITDELTTNYAAPVYCDGKLIAVIVVNVPISKFSMLFQSSTHETGFFVVSSDRKHIFGVD
NYSSSESQWAKYILEYPGLLQNTALRRDITYRDGMFFVSQFIQGPNWIAVYVFDWFTIFH
ALKSKLITLIILTFLVLGILWGFILLLDRLILAPLRIQSRLVYESDAFNHAVLNTAPVGL
SIYDPFSNKVVMQNEAAECLLLPSECVNFYREILVKAQLNRHKNQSEVQSNVHEVQITEA
SVLSACGEQREISVAYSHIRYQQREVILFSLTDISAQKTTVRLLEQAREMADQANQAKSM
FIAMMSHEIRTPLHGALGNLELLALEPLTLEQKARVSTINRAFDALLALINDILDLSKIE
AQELQLHPEPFQLIELVERCAQTFAPVILDKNLRFFCLIDPELTGTWSGDGHRLSQVLMN
LVSNARKFTEEGSITIRAIPGEVRDDIRWVRISVSDTGIGISHAHINKVFEPFVQADRSI
NSRFGGTGLGLTLCRRIMTLMGGNITVDSEEGEGSIFTINVPLRHNLSYENRSQFADKYR
FSTVVIVCDSPLWQFNLIEQFKCWIPDVEIIEASLLKPLPAPRTNAVVVFATSGIAISEP
WRDILYTYLDTVILSSDGPLYPERRNQDLCVTSFSTSMFKLILAACGKHDEVLEPLTVRQ
QRSEIHHYAKVLIAEDDPLNRTLLEHQLAALGYHYVDSVGDGQQALEYCSTKPYDIIVTD
LGMPQMDGFEFLKAIRAKGINTPVIVSTADINGITQIKAAGIAEVLHKPITIERLNRALE
HVLGKVMSDSQEISMKSLSTVTLIDMQALFVAGWNSDEQGLLDALDANDGKRFLGYLHRL
KGALLALDEKSLVASIDILRRHIESQGLAQNVVHIDVFMEKLRSLVILYSKNKALPEFCS
SDK
NT seq
3432 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcttctcaattcaatctacgaaatttattatgcaaatatttgaaatgcactccg
ctctctgatcctgacttacccggacgttattcccgttggttattatttagtggtggatta
gctatcagtttaattgtgcttactatatcagttgtagaaattacaatattatctgaacgt
tttttagacgaacgtgtacatttgtttcaaattcagcgaggtatcatcaaggaaaatctt
gatagaacccaggctcgtttgaaacaaagggttgaattttatgagatgttgtggcgctta
cgtgatggggaaaatttacccgtgttgcgttatcgtcaagagttactaaaaaaaaatggt
gtcatagttaccgatactgatgtaaccgctacccctgcgatgatcttatcttcatctagt
catatcgtaactgagcatgaactggctgattttttaggcttaatgcgtgaggtgtcgcca
acacctttgttacgtcagcgagaaaatgggcattaccttggcggttatatatattcatct
gatcatcgattgctagcattgtggccaccattggcattaactaaattgaataatgtgaag
gaagttggcattaataaatttatcaatgatgctgtaactagggtcgatgctgtgatagca
accaccaatgtgaataaattatatgatgagagaatgttctgggtacccttttataaatcg
cctattactgatgaattaactacaaattatgccgccccggtttattgtgatggtaagctt
atcgctgttattgtcgtaaacgttcctatcagtaaattctctatgctctttcagagttcg
actcatgagacaggtttttttgttgtctccagtgatcgtaagcatatattcggtgtagac
aattacagctcaagtgagagtcaatgggcgaaatatatcttggaatatcctggattatta
caaaatacggctttgcgccgagatataacttatcgtgatggcatgtttttcgtgtcacaa
tttatccaaggaccaaactggattgcagtctatgtatttgactggtttacaatttttcat
gcactaaaaagtaaactaatcacattaattatactgacatttttagtgctggggatcctg
tggggctttattcttttgctcgaccgtttaatacttgcgccactacgaatacagtcgcgt
cttgtatatgaaagtgatgcattcaatcatgccgtgctgaatactgcaccagtaggtttg
agcatttatgatccttttagcaataaagtggttatgcaaaacgaagctgccgaatgctta
cttttaccctcagaatgtgtgaatttttatagagaaatattagttaaagcacagttgaat
cgccataaaaatcaatccgaagtgcagtcaaacgtccatgaggtgcagataacagaagca
tcagtgctaagtgcatgtggcgagcaacgggaaatatctgtggcttattctcatattcgt
taccaacaacgcgaagtcatcttgtttagcttgaccgatattagtgctcagaagaccacg
gtccgtttgttagagcaagcgcgtgagatggctgaccaagctaatcaggccaagtcgatg
ttcatcgcgatgatgagccatgaaattcgtacacctttgcacggtgcattgggtaatttg
gagttgttagcgttagagcccttaacgctagaacaaaaggcgcgagtttcgacaattaac
cgtgcatttgatgcgttattggctttgatcaacgatatcttggacttgtctaagatagaa
gctcaggaattacaattgcatcctgagccatttcaacttattgagctggttgaacgctgt
gcacagacttttgcacctgtgattctggacaagaatttgcgctttttctgcctaattgat
cctgaacttacaggcacttggagtggagatgggcacagattatcccaagtattgatgaac
ctagtgagtaatgctcgaaaatttactgaggaggggtctattactatcagggctattcct
ggtgaagttagggatgatatccgctgggtgcgcatttctgttagcgatacaggaattggt
atctcgcacgcacatatcaacaaagtatttgaacctttcgtacaagcagacagatctatt
aacagtcgttttggtggcacagggttagggttgactttatgtcgacggatcatgacgtta
atggggggcaatattacagttgatagtgaggagggagaggggtctatatttacgatcaat
gtgcctttacgtcataacctttcatacgaaaaccgttcccaatttgcagataaatatcgt
tttagcactgtcgtaattgtatgtgattcaccactttggcagtttaatctgatagagcaa
tttaaatgctggatccccgatgttgaaatcattgaagcaagcttgttaaagcctttgccc
gcaccaaggacaaacgctgtagttgtctttgcaacttcagggatagcaatatcagagcca
tggcgagatatcttatatacgtatcttgatactgtgatcctatccagcgacggccctcta
taccctgaacgtcgaaaccaagatctatgtgtaacctcattctcgacatcaatgttcaaa
cttattttggctgcatgtggtaagcatgatgaagttcttgaacccttaactgttcgccaa
caaagatcagaaattcatcattatgccaaggtattaattgctgaagatgatccgcttaac
cgaaccttacttgagcatcaacttgccgcacttggttatcattacgttgatagcgtaggg
gatgggcaacaggctttagaatactgctcgaccaagccttatgacattatagtgactgat
cttggcatgccgcagatggatggatttgaatttcttaaagcaatacgagctaaaggaatt
aatacacccgtgattgtcagtacggcagatattaatggtattactcaaattaaagctgca
ggtattgctgaggtgttacataagcccattaccatcgagagattgaatagagctcttgaa
cacgttcttggaaaggtgatgtcggatagtcaagaaataagtatgaaatcattatcgaca
gtgacacttattgatatgcaagcgctgtttgttgctggctggaacagtgacgaacaaggc
ttgcttgatgcattggacgcgaatgacggtaagcgctttcttggttatttgcatcggcta
aaaggtgcactactggcattggacgaaaaatctttagttgcaagtattgatattctgaga
cggcatattgagtcccaaggcttagcgcaaaacgtagtacatatagatgtatttatggaa
aagctaagatcactagttattttgtacagtaaaaataaggcgttacctgagttctgttcg
agtgacaaatga
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integrated database retrieval system
