Shewanella sp. WE21: CKQ84_17235
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Entry
CKQ84_17235 CDS
T05404
Name
(GenBank) glycine/betaine ABC transporter
KO
K02002
glycine betaine/proline transport system substrate-binding protein
Organism
shew
Shewanella sp. WE21
Pathway
shew02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
shew00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CKQ84_17235
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shew02000
]
CKQ84_17235
Transporters [BR:
shew02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Glycine betaine/proline transporter
CKQ84_17235
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OpuAC
DUF2888
Motif
Other DBs
NCBI-ProteinID:
AVI68739
LinkDB
All DBs
Position
3893168..3894061
Genome browser
AA seq
297 aa
AA seq
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MNSLNKSTNMESSQGKPMIRMGVTDLSFHRVTAAVVAHVIGIMGKEVQRSYALHEANFEQ
LGEGKVDMLCSAWLPHSHGIYRQGVEERVATRQLGLHYEPYALWGVPDYVPAEQVSSIED
LLKPDVQQRMRPIIQGIGEGAGITRFSKNIMTQYGLTAAGYQFRTGTQADCVAAFESAVA
VNDWVVVPLWHPQFLHHQYGIRDLQDPKGLLGGKDKAVLLARERELAVNFSPAQIQVLDN
IVLSNQMVAELDYAVNRQGMTEDEAAANWLTVNPQHLTTWLAPLLNPANVSSQEVTL
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgaattcattgaataagagtacaaatatggagagctcacagggtaagccgatgattcgc
atgggagtgacggacttaagttttcatcgcgtcaccgccgctgtggtggcccatgtgata
gggattatgggcaaagaggtgcaacgaagctatgcattgcacgaggctaattttgagcag
ctaggtgaaggcaaagtggatatgctgtgttcagcatggctgccccatagccatgggatt
tatcgacaaggtgtcgaagagcgagttgctacgcggcaactcgggctacattatgagccc
tatgcgctctggggcgtacccgattatgtgcctgctgagcaagtgtcgagcattgaggat
ttactcaaacctgacgtgcagcaacgtatgcggcccatcattcaagggattggtgagggg
gcggggatcacgcgattttctaaaaatattatgacgcaatatggattaacggcggcgggt
tatcaatttagaacaggcactcaggccgactgtgtcgccgcttttgagtctgccgtagcg
gtaaacgattgggtggtcgttcctttgtggcatccacaatttttacaccatcaatacggt
attcgcgatcttcaggaccccaaaggtttactcggggggaaagataaagcggtattgctc
gcccgtgaacgcgagttggcggttaatttctcgccagcacaaattcaggtgctggataac
atagtattatcgaatcaaatggttgcagaactcgattatgcggttaatcgacaaggaatg
acggaagatgaggccgctgcgaactggctgacagtcaatcctcagcatttgacgacctgg
ttagccccgctgcttaatcctgcgaatgtctcatctcaggaggtgacattatga
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