Shewanella sp. WE21: CKQ84_17380
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Entry
CKQ84_17380 CDS
T05404
Name
(GenBank) lytic transglycosylase
KO
K08305
peptidoglycan lytic transglycosylase B [EC:
4.2.2.29
]
Organism
shew
Shewanella sp. WE21
Brite
KEGG Orthology (KO) [BR:
shew00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
shew01011
]
CKQ84_17380
Enzymes [BR:
shew01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
CKQ84_17380
Peptidoglycan biosynthesis and degradation proteins [BR:
shew01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
CKQ84_17380
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SLT_2
PG_binding_1
Glucosaminidase
Lipase_chap
DUF4479
Motif
Other DBs
NCBI-ProteinID:
AVI68742
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Position
3920769..3922070
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AA seq
433 aa
AA seq
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MKIKGLTYLFASIAACVSLSACSSAPTASASANATSTNASDIAAEANQMPDISASVQSNA
EAFPMCLTGLQARARAEGLSEATINSTIANLKFVPRVIELDQQQPEFSQTFDNYFSKRAT
EWRVNEGRRLLQKHSVLLNQLAHKYGVPPQYILSFWGLETNYGSYKGKMSVLNSLATLAC
EPRRSNYFTIELMQALKLKEKYQFDDDTMVGSWAGAMGHTQFMPSAYAKYAVDGDGDGKA
DLWNSITDALTSAANFLQHLGWQRNQRWGREVLLPKDFSYSHLGAKQPLSLSEWAALNVT
QSNGQPLPAVDIQAALYLPAGHTGPAFLGYENFNVIMRWNRSEFYAITVGHLADRINGGQ
PLTVSPPEQPRLSREQVKQLQTKLNEAGFDVGKPDGVLGRNSMAGLQAFQRSKQMIADGF
PSPEVFTALGLSL
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
attaaaattaaagggttaacttatctgtttgcgagtattgccgcctgtgtcagtctgagt
gcctgttcaagtgcgccaacggcgagtgccagtgctaacgcaaccagcactaacgcaagt
gacattgctgctgaagccaatcaaatgcccgatatcagtgctagcgtacaatctaatgca
gaggcgtttccaatgtgcttgactggactgcaagcgcgagcacgtgcagaaggcctgtca
gaggcgacgataaactctaccattgcgaacttgaaatttgtccctcgagtgattgagctg
gaccaacagcaacccgaattcagccagacatttgataattatttcagtaagcgcgcgacc
gaatggcgcgtcaatgaaggccgccgtttactgcaaaagcacagtgtcttactcaatcaa
ttagcgcataaatacggcgttccgccgcaatatatcttgtctttttggggactggaaacg
aactacggttcctataaaggcaaaatgtcggtattgaattcgctggcgactttggcttgt
gagccacgccgtagcaattatttcaccatagagctgatgcaagccttaaaactgaaagaa
aagtatcagttcgatgatgacactatggtgggatcatgggcaggtgctatgggacatacg
caatttatgccttctgcgtatgccaaatatgcggtcgatggtgatggggatggtaaggcc
gatttatggaatagcatcacagatgcgctcacgtctgccgcgaactttttgcagcacttg
ggttggcagcgtaatcagcgttgggggcgtgaagtcttgttgccaaaggattttagttac
agtcatttaggtgcgaaacagcccttgtcgttatctgaatgggcagcgctcaatgtaacg
cagtcgaatgggcaacctttgcctgccgtcgatattcaagctgcgctgtatttgcctgcg
ggacacacaggcccagcctttttaggttatgagaattttaatgtgatcatgcgttggaat
cgctccgaattttatgccattacggtagggcacttggccgatcgtattaatggtggacaa
cccttgacagtcagtccgcctgagcaaccacgcctaagtcgcgagcaagtaaagcaactg
caaacaaaactgaacgaggctggatttgatgttggtaagcctgatggcgtgttgggacgt
aactctatggcagggttgcaagcctttcaacgtagcaaacagatgattgccgatggcttc
ccaagcccagaggtgtttactgctttaggactatcactttag
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