Shewanella sp. WE21: CKQ84_18040
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Entry
CKQ84_18040 CDS
T05404
Name
(GenBank) porphobilinogen synthase
KO
K01698
porphobilinogen synthase [EC:
4.2.1.24
]
Organism
shew
Shewanella sp. WE21
Pathway
shew00860
Porphyrin metabolism
shew01100
Metabolic pathways
shew01110
Biosynthesis of secondary metabolites
shew01120
Microbial metabolism in diverse environments
shew01240
Biosynthesis of cofactors
Module
shew_M00121
Heme biosynthesis, plants and bacteria, glutamate => heme
Brite
KEGG Orthology (KO) [BR:
shew00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
CKQ84_18040
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
shew04147
]
CKQ84_18040
Enzymes [BR:
shew01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.24 porphobilinogen synthase
CKQ84_18040
Exosome [BR:
shew04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
CKQ84_18040
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ALAD
DUF3502
Motif
Other DBs
NCBI-ProteinID:
AVI67607
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All DBs
Position
complement(4038240..4039223)
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AA seq
327 aa
AA seq
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MLNTPPLRRLRRLRNSEAMRDLLRETHISLSDLIHPLFIEEHITHAVPISTLPGISRLPE
SALANEVRELYALGIRYVMPFGISHTKDDKGSDTWDDNGLLARMVRTIKATVPEMMVIPD
ICFCEYTNHGHCGVVHNNEVCNDLTVENLVKQSITAAKAGADMLAPSAMMDGQVKAIRQG
LDAAGFEHVAILAHSAKFASSFYGPFRAAVDCELSGNRKGYQLDYANGRQALLEASLDEA
EGADILMVKPGTPYLDVLSRLRQETHLPLAAYQVGGEYAGIKFAALAGALDERAVVTETF
IGLKRAGADLIVSYYTKQYAQWLTESR
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgttaaacacgcctccattgcgtcgcttaagacgcttacgtaattcagaagcaatgcgc
gatctgctgcgcgaaacccatatttcgctgagcgatcttatccatcccctgttcattgaa
gagcatatcacccatgccgtgcccatctccacgctaccaggcatcagccgcttacctgag
agcgcactggcaaatgaagtgcgcgagctttacgccctcgggatccgctatgtgatgccc
tttgggatttcccacactaaggatgataagggcagcgatacatgggacgacaatggttta
ctcgcccgtatggtgcgcaccattaaagctaccgtgcctgagatgatggtgatccccgac
atttgtttttgtgaatacacaaatcacggccattgcggcgtagttcacaataatgaagtc
tgcaacgacctcaccgtcgaaaatttagttaagcaatcgataacagccgccaaagcgggc
gctgatatgttagcaccatcggcaatgatggacggtcaagtgaaagccattcgccaaggg
ctcgatgccgcaggttttgaacatgtggcgattctggcccactctgcaaaattcgcttct
tctttttacggtccttttagagcagcggttgattgtgaactcagcggaaatcgcaaggga
tatcaactggattatgctaatggtcgtcaagccctgttagaagcctcattagatgaagcc
gaaggcgccgatatcctgatggttaaacccggcacaccctacttagatgtgctcagccgt
ttaagacaagaaacccacttgccactcgccgcctatcaagtcggcggtgaatatgcgggc
attaaatttgccgcccttgcgggcgcgttggatgagcgtgctgtggtgactgaaacgttt
atcggtttaaagcgggcgggtgcagatttgattgtcagctattacaccaaacaatacgcc
caatggttaactgaaagccgatag
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