Shewanella sp. WE21: CKQ84_18115
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Entry
CKQ84_18115 CDS
T05404
Name
(GenBank) phenylalanine--tRNA ligase subunit beta
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
shew
Shewanella sp. WE21
Pathway
shew00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
shew00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CKQ84_18115
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
shew01007
]
CKQ84_18115
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
shew03016
]
CKQ84_18115
Enzymes [BR:
shew01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
CKQ84_18115
Amino acid related enzymes [BR:
shew01007
]
Aminoacyl-tRNA synthetase
Class II (U)
CKQ84_18115
Transfer RNA biogenesis [BR:
shew03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
CKQ84_18115
Prokaryotic type
CKQ84_18115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
FDX-ACB
tRNA_bind
B5
HTH_MCM7
Motif
Other DBs
NCBI-ProteinID:
AVI67619
LinkDB
All DBs
Position
4052400..4054787
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AA seq
795 aa
AA seq
DB search
MKFSESWLREWVNPSVSREALSHQITMAGLEVDDVEAVAADFSGVVIGEVVECGQHPDAD
KLRVTKINVGGSELIDIVCGAPNCRQGLKVAVAMVGAVLPGDFKIKKAKLRGMPSEGMLC
SYSELGINVESDGIIELPLDAPLGTDIRDYLQLNDAVIDVDLTANRADCLGMAGLAREVG
VLNRQTVVEPQWQAVTPTTDAQVTINVNAPAACPRYLGRVVKNVNVKAPTPLWMQEKLRR
SGIRSIDPIVDITNFVLIEFGQPMHAFDLAKLTGDIEVRLGTGEEKITLLDGSEVTIPSD
TLVIADDARPLALAGVFGGEYSGVSDTTQDILLECAFFAPLAIMGKSRRLGLHTDSSHRF
ERGVDPEMQHKVIDRATRLVLDICGGEAGPVVEAKSEADLPKPAQIVLRRSKLDRILGHH
VPDTDVVEILQRLGFSVVVGQDSWQVTTATYRFDMAIEEDLIEEVARIYGYNNIPNTAPV
AALRMSDHKESDLSLKRVRALLVARGFQEAVTYSFVDPKLQNLVHPGLDAMVLPNPISSE
MSAMRLSMFTGLLAAVGYNQSRQQSRVRLFETGLRFVPDINAESGVRQQAMLACVITGLQ
NDEHWAMESKTVDFFDLKGDLEAIIGLTVSASEFSFRGATHSALHPGQCAEILRNDRVIG
HIGAIHPSLEKPFGLNGKTIVFELELDALLHTSLPLAQAVSKFPANRRDIAVVVDESVSA
GDVMKLIRKVGENQLVGINLFDVYLGKGVEPGKKSLAIALTLQDTTRTLEEKEIAETVGS
VVSALKSEFNASLRD
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttagcgaatcttggcttcgtgaatgggtaaacccttcagtcagccgtgaagca
ttatcccaccagatcactatggccggtctcgaagtcgatgacgttgaagccgtggctgcc
gattttagcggtgtcgtgattggtgaagttgtggagtgtggtcagcatcccgatgccgat
aaactgcgcgtgaccaaaatcaacgttggtggtagcgaacttatcgatatcgtctgcggt
gcaccaaactgccgtcagggtcttaaagtggccgtggctatggttggcgccgtattacct
ggcgatttcaaaatcaagaaagccaagctgcgtggcatgccatcagaaggcatgttgtgc
tcgtacagcgagcttggcatcaacgtcgaaagcgatggcattatcgaattgccattggac
gcgccactcggcactgacatccgcgattatctgcaactgaatgatgccgttatcgatgtg
gatttaacggctaaccgtgccgattgcttaggtatggcaggtcttgcccgtgaagtgggc
gtgttaaaccgccaaacagtggttgagccacagtggcaagccgtcacgccaacgacagat
gcacaggtcacgattaacgttaacgcgcctgcagcgtgtccacgttacttaggccgtgtg
gttaaaaacgtcaatgttaaagcgcctacgccattatggatgcaggaaaaactgcgtcgt
agcggtattcgctctatcgatcctatcgtagacatcactaactttgtgttgattgaattc
ggtcaacctatgcacgctttcgatcttgccaaattaaccggcgatatcgaagtgcgttta
ggcactggcgaagagaaaatcactctgcttgatggcagcgaagttacgattccaagtgat
accttagtgatcgccgatgatgcgcgtccattagccctcgccggcgtgtttggcggcgaa
tactcaggcgtgagcgacacgacccaagacatactgcttgaatgtgccttcttcgcgccg
cttgccattatgggtaagtcacgtcgtttaggtttgcatacagattcatcacaccgcttt
gagcgtggtgttgaccctgagatgcaacacaaggttatcgaccgtgcgacccgtttagta
cttgatatctgtggtggtgaagctggccctgtagttgaggctaaatcagaggctgattta
cccaaacctgcacaaatcgttttacgtcgtagcaagttagatcgaattttaggccaccat
gtaccagacacagatgtggtcgaaattctacaacgtctcggcttcagtgtggttgtgggc
caagatagttggcaggtcactaccgcgacttatcgttttgatatggcgattgaagaagat
ttgatcgaagaagtggcccgtatttacggttataacaatatcccgaatacggcgcctgtt
gctgcgctgcgtatgtcagatcataaagaatctgacttaagcctaaaacgcgtgcgtgcc
ttattggtcgctcgtggtttccaagaagcggtaacctacagctttgtcgatccaaaactg
caaaatctggttcaccctggtttagacgctatggtgttaccaaacccaatttccagtgaa
atgtcggccatgcgcctgtcaatgttcaccggtttattggccgccgttggctacaaccaa
agtcgtcaacagagtcgcgtgagactttttgaaactggcctgcgctttgttcctgatatc
aatgcagaatccggtgtaagacagcaagcaatgctcgcttgtgtcattactgggctccaa
aatgatgaacattgggctatggaatcgaaaactgttgattttttcgaccttaaaggtgat
ttagaagcaattatcggcttgacagtttccgcatcagaatttagctttagaggagcgacg
cattctgctctccatccggggcaatgtgctgaaatattgagaaatgatcgagtgatcggt
catataggtgcaatccatcctagtttggagaagccttttggactcaatggtaaaaccatc
gtttttgagttggaattggatgctttattgcataccagtttgccgctagcccaagctgta
tctaagtttccagctaatcgtcgtgacatcgcagtcgtagtagatgagagtgtatctgca
ggtgatgtaatgaaattgataagaaaagttggcgaaaatcagttggttggcataaacttg
ttcgatgtatacttaggtaaaggtgttgaacccggcaagaagagcctggcgatagcactt
acattacaagacactactcgtacgcttgaggaaaaagagattgctgagaccgttggttca
gtcgtttctgcccttaagtccgagttcaacgcatcgttgagggattaa
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