Shewanella sp. WE21: CKQ84_18205
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Entry
CKQ84_18205 CDS
T05404
Name
(GenBank) DNA-binding response regulator
KO
K07666
two-component system, OmpR family, response regulator QseB
Organism
shew
Shewanella sp. WE21
Pathway
shew02020
Two-component system
shew02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
shew00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CKQ84_18205
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CKQ84_18205
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
shew02022
]
CKQ84_18205
Two-component system [BR:
shew02022
]
OmpR family
QseC-QseB (quorum sensing)
CKQ84_18205
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Response_reg
Trans_reg_C
DASH_Dam1
Motif
Other DBs
NCBI-ProteinID:
AVI67636
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All DBs
Position
4072232..4072891
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AA seq
219 aa
AA seq
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MRIMLVEDNELLAQGICLSLAKLGMQVDHLNSYQQALLGVKNESFSAIVLDLGLPDGNGK
ELLKAWRQQGVSIPTIVLTANTDFDTKLECLDMGADDYLGKPFDVRELAARIRAIVRRQY
GLDHNSLIIGALCIDLNTREVTFRDQNVLLSRREFQLLLELAQSAGRVLTRSQLEQLTYG
WDEVGSNSIEVHIHHLRKKLANELIKTVRGIGYTLIEIN
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atgcgtattatgttggttgaagacaatgagttattagcccaagggatttgcttgagtttg
gcaaagctgggcatgcaagttgatcaccttaatagttatcagcaagccttgctgggggtt
aaaaatgaaagcttcagtgccatagtgctcgatctgggattgcctgacggtaatggtaaa
gagttgcttaaagcttggcgtcagcagggcgtgtcaattcccacaatagtcctgaccgcg
aatacggattttgacactaagctcgaatgtttagacatgggcgccgatgattatctcggt
aaaccttttgatgtgcgtgaattagccgcgcgtattcgtgctatcgtcaggcgtcagtat
gggctcgatcacaacagtttgattattggtgctttgtgtatcgatttaaatacccgtgaa
gtgacctttcgcgatcaaaatgtgctgctttcacggcgtgaatttcaattactgctcgaa
ctcgctcagtcggcagggcgtgtattgacccgcagccagttagaacagttaacctatggc
tgggatgaggtcggcagtaattcaatagaagtgcatatccaccatctgcgcaaaaaactt
gccaatgaattaatcaaaaccgtgcgtggaattggctataccttgattgaaataaattaa
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