Shewanella sp. WE21: CKQ84_18255
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Entry
CKQ84_18255 CDS
T05404
Name
(GenBank) hypothetical protein
KO
K09800
translocation and assembly module TamB
Organism
shew
Shewanella sp. WE21
Brite
KEGG Orthology (KO) [BR:
shew00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shew02000
]
CKQ84_18255
Transporters [BR:
shew02000
]
Other transporters
Pores ion channels [TC:
1
]
CKQ84_18255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TamB
Motif
Other DBs
NCBI-ProteinID:
AVI67644
LinkDB
All DBs
Position
complement(4082370..4086350)
Genome browser
AA seq
1326 aa
AA seq
DB search
MSQPPEHNKPNEQDIVDNPITEAEATETVVTSVTPSVSFIQRLWRQFKLWTRIIIYVPLG
LLVLIALLLGTEFGSRISVGLADQFVPDLELTYTSGSINKDLALSHAAWSMAGMNVQLED
LHLLWQPACLLQKRLCVNSLSAAKVDVTINTLALSADSNEAPVAPLDEEPSELLLPFDIV
LDSAELNGVNIQVDDMQFTANRLNAEAQWFAEGLSVKQLSSEGLFILIPASTDVATQTST
AAVTNAADPSTATGTTQTPSASPSLPKEAEWALAQLPQVFMPFPVTVNALTLDNTTLQIG
DRKDVFSHAELQGHFREYQLTLDHLAISHTDGSADITGSLTLDKDYPLDLEANLTLNQLV
ELPDLTHQVLTLKLSQSLGQLQVNAVAKGDADFALDGQITLQDPNLPYKVKLEQTRLQWP
LKTPQYSVSDATLDSQGDLNRQEASLTGQLITPFHKVLDIDTDIQHQDAKLTINNLDVMG
AIGKVKLTGELDYQKAISWNANLWINDVKLQEIQQPQTDTAQSTTGLPDSLISGKLRTKG
SFADPRWQVSLSDTELTGTLQGYPFDITGDISVNDSLYVSAKGLNAKVLGSTLALKGEAN
ANWDLQGELQVPDFGLWLPKASGQLQAQINVTGDEKHPQVELTAQLAELYYQNIKLQESN
LKAYYKPLDQHEFAISLKSKTLQIAEQNLDTVTLGAKGTINAQKLTLNATGDLGLDATMS
SQYDVKKSRLQLDVDRLNLNTPVGLWQLDNTINLAWDQIKNQGSITPFCLMNPNSRICLN
SNTPIGKKGSAQVSYSGNPGQLLVPILPTNMRWNGPASLLANVAWAAGRKPTADVNFDFA
PGSIMLKRDKNREVTINYQNLSLKATLDAKRLATVLDFESEGVASWQSEINVNVTPDRTL
SGYANIKQINLQPLGEFFPQLNTVQGLLTSQLNFAGSLDAPEVSGSMALTEGALALTANP
TLIDKIDMSMSFAGQQAQLKGRWMMGNGLGRVNGQLQWPQGQFSGELALEGDKLAVIQPP
LAILDVSPEINLTFNSKQLAVKGKIAVPSGNIKIVPLAEGGVAASEDVVFDDSIAATQPK
TSPYAIVADLNISVGNELRIDGMGLKGKLQGTLKLQQQAFRPPLLFGNIKVNQGSYKFMG
QTLKIRTGEVQFVGPTSLPNLNIEAIREIKTEDLVAGVRVTGTPSRPVVTLFSNPAKEQA
EILSYIIKGSGFNSANNEQNNSLMMGAALGLGSQVGGGAINNLGNTATGLIEEFGFSNVQ
LDTNDEGRVAISGFIGDNLMVKYGVGVFNPGYEMTVRYYLLSQLYLETVSGTLGQSLDIY
YNFNIK
NT seq
3981 nt
NT seq
+upstream
nt +downstream
nt
atgagccagcccccagagcataataagccaaacgaacaagatatcgttgataatcccatc
actgaagccgaagccactgaaaccgtagtgacctctgtcaccccatcggtgtcattcatt
caaagactgtggcggcagttcaaactctggactcggattattatctatgtgccattaggg
cttttagtgttaatcgccctattactcggcactgaatttggctcgcgcattagcgtgggt
ttagccgatcaatttgtacccgatcttgaactgacttatacctctggttccattaacaaa
gacttagccctatctcacgcggcttggtctatggccggaatgaacgtgcaacttgaggat
ctgcatttactgtggcagcccgcctgtttactgcaaaaacgcttatgcgtgaatagctta
tctgcggctaaagtcgatgtcactattaataccctagcgctttctgcagactcaaacgaa
gcgccagtcgcgccacttgatgaagaacccagcgagctcctattaccctttgatattgtt
ttagattctgctgaactcaatggtgttaatatccaagtggatgatatgcaatttaccgct
aatcgtcttaacgcagaagcacaatggtttgccgaaggtttgtcggttaaacagctatcc
agcgaaggattattcatactgatccctgcatcaaccgatgtagcaacacaaactagcacg
gcagcggtaacgaatgcagcagatcccagcacagccacgggaacaacacagacaccatcg
gccagtccgtcgctaccaaaagaggctgaatgggctttagcacaattgccacaggtattt
atgcctttccctgtgacggtcaatgccctaacgctagacaacaccacactgcaaatcggc
gatcgtaaagatgtttttagccatgcagaactacaaggccatttccgtgaataccaattg
accttagaccatctcgccattagccacaccgatggcagcgccgatatcacaggcagccta
acgcttgataaagattatccactcgatttagaggcaaatctcacccttaaccaactagtc
gaattgccagatctcactcatcaagtattaacgttaaagctgagccaaagtttagggcaa
cttcaggtgaatgccgtcgccaagggcgatgccgactttgctctagatggccaaataaca
ctgcaagaccctaacctgccctacaaggtgaaacttgaacaaacacggcttcagtggcca
ctgaagacccctcaatactcggtaagcgatgccacactcgatagccaaggcgacctcaat
cggcaagaggcgagtcttactggccaactgatcacaccatttcacaaagtgctcgacata
gacactgacatccaacatcaagatgctaagttaaccatcaataatcttgatgtaatgggc
gcgattggtaaggtcaaactcacaggcgaactcgattatcaaaaagccattagctggaac
gccaatctctggatcaatgacgtcaaattacaagaaatacagcagccacaaacggataca
gcgcaaagtacaacgggtttaccggacagtttgatttcaggaaaattacgcactaaaggc
tcatttgcagacccccgttggcaagtatccctgagcgatactgagctcactggcacttta
caaggttatcccttcgatattacaggggatatcagtgtgaatgattccctgtatgtcagt
gctaaagggctgaacgccaaagtattaggttcaactctggcactcaaaggcgaagccaat
gccaactgggatctccaaggtgaattacaagtgcccgactttggcctgtggttacctaag
gccagcggccaactacaggcgcagatcaatgtcactggtgacgagaaacaccctcaggtc
gagcttactgcgcagctggcagaactttactatcaaaacattaaactgcaggaatctaat
ttaaaggcctattacaagccgctagatcaacatgagtttgctatctcgctaaaatcaaaa
accttacagattgcagaacaaaatttagatacagtgacactcggggcgaaaggtaccatt
aacgctcaaaaactcactctcaacgccacgggcgatcttgggctcgatgcaacgatgagc
agccaatacgatgtgaagaagtcacgactacagctcgatgttgatcgtttaaatctcaac
acgcccgtaggcctatggcagctcgataacaccattaatctggcttgggaccaaatcaag
aatcaaggcagcattacgcccttttgcctcatgaatcccaatagccgtatctgcctaaac
agtaatacaccaataggtaaaaaaggcagcgcacaggtgagctactcaggtaatccaggg
caattacttgtcccaatattaccaacgaatatgcgttggaacggccctgcatcgctatta
gccaatgttgcatgggctgctggccgtaagcctactgccgatgtgaactttgattttgct
cccggcagcattatgctcaaacgggataaaaatcgtgaagtcaccattaattaccaaaac
ctgtcattaaaagcgaccttagatgcaaaacggctggcaacggttttagattttgaatca
gaaggcgtggccagttggcagagtgagattaacgtcaatgtcacacctgatcgcaccctg
tcaggttatgccaacatcaagcaaatcaacttgcagccacttggagagtttttccctcaa
ttaaatacagtgcaaggtttactgacgagtcaacttaactttgcgggtagtctagatgcg
cccgaagtatcggggagcatggccttaactgagggcgccttagccctaacagcaaaccca
acattaatcgacaaaattgacatgtcgatgtcatttgcgggtcaacaagcgcagcttaag
ggacgctggatgatgggcaatggtttaggcagagtgaatggtcaactgcaatggccccaa
ggtcaatttagtggcgagttagccctcgaaggcgataagctcgccgtgatccagccgcca
ctggctattctcgatgtctcccccgagatcaacttaaccttcaacagtaagcaactggca
gtaaaaggaaaaatagcagtaccttctggcaacattaaaattgtgccattagcggaaggc
ggtgtcgcagcctccgaagacgtggtatttgacgactccattgccgccactcagcctaaa
actagcccctacgccatagttgcagatctgaatatcagtgtggggaacgaactcagaatt
gatggtatgggcctcaaaggtaaactccaagggaccttaaagctacagcagcaagctttc
cgtcctcctttgctcttcggtaatatcaaagtcaatcaaggtagctacaagtttatgggc
caaaccctaaaaatccgtactggtgaagtgcaatttgtagggccaacgtcattaccaaac
ctgaatattgaagcgatacgggaaattaagactgaagacttagtggcaggtgtacgcgtc
acaggcacgccatcacgcccagtggtgaccttattctccaatccagccaaagagcaagcc
gaaatcttgtcttacattatcaaaggcagtggctttaacagcgccaacaatgagcaaaat
aactcgctgatgatgggcgcggcactcggtttaggctcacaggtgggcggcggcgcaatt
aacaacctagggaatactgcgacaggactcattgaagaatttggtttctctaacgtgcaa
ctcgacactaatgatgaagggcgtgtggcgatcagtggctttatcggcgataacttaatg
gtgaaatacggagtaggtgtatttaaccctggttacgaaatgacagtcaggtattacttg
ctctcacaactctatctagaaaccgtgtcaggcactttaggccaatcacttgatatctat
tacaacttcaatatcaagtaa
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