Shewanella sp. WE21: CKQ84_19295
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Entry
CKQ84_19295 CDS
T05404
Name
(GenBank) SAM-dependent methyltransferase
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
shew
Shewanella sp. WE21
Brite
KEGG Orthology (KO) [BR:
shew00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
shew03009
]
CKQ84_19295
Enzymes [BR:
shew01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
CKQ84_19295
Ribosome biogenesis [BR:
shew03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
CKQ84_19295
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Methyltransf_31
Ubie_methyltran
RsmF-B_ferredox
FtsJ
Methyltransf_25
TRM5-TYW2_MTfase
GCD14
Methyltransf_4
MTS
PrmA
Methyltransf_15
Methyltransf_5
PYRIN
PCMT
Motif
Other DBs
NCBI-ProteinID:
AVI67805
LinkDB
All DBs
Position
4325802..4327016
Genome browser
AA seq
404 aa
AA seq
DB search
MLNSPLSASSNELVISILTMVLSQGKPLDRAYSQHFSGLQLVPAEQARIALTTGDILRRL
NLYCYLAEISPDEMERFGSKLLNAWHLFHGLELPKMQYSLQVDEVRLAERIEQAKTKPVL
WDGCPEWLDVMGREQLGESWEKERAALSTAPKRFLRANGLKVTRDELAAKLAAEFVSTLC
VDGVDSALEVTSDSALFRTQSFKDGLFEQQDAGSQRVAAALDAKPGMKVIDACAGAGGKT
LHIAAQMQGKGRLLAMDVEQWKLDKLKERARRNGAHNVETRVIASSKTIKRLKLSADRVL
LDVPCSGLGVLKRNPDAKWRDTVERLPVLMELQKHILNSYSRMVKVGGIVVYATCSIFPC
ENRGQVDAFLAENPNFCLIEDESISPADSGFDGFYLAKLERIQE
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgttgaattctccgctttctgccagctcgaacgaattagtgatcagtatcttaactatg
gtgctgagccaaggaaaacccttagatcgggcctattctcagcatttttctgggttgcaa
ttagtacccgccgagcaggcgcgtatcgcattaacgacgggtgatatcctacgtcgttta
aatttatattgttatctggcggaaatcagcccagatgagatggagcgttttggctctaaa
ttgcttaatgcctggcatttatttcacgggcttgaactgcctaaaatgcaatattcgctg
caagttgatgaggtgcgtttagctgagcgtatcgagcaagcgaaaactaagcctgtgttg
tgggatggttgccctgagtggctcgatgttatgggccgtgagcaactaggtgagtcttgg
gaaaaagagcgcgccgcgttaagtactgcgccgaaacgttttttacgcgctaacggcctt
aaggtgactcgtgatgaactggccgctaagcttgctgccgagtttgtgagcacgctctgt
gttgatggggtcgattcagcccttgaagtgacctccgattcagccttgttccgtacccaa
agctttaaagatggcttattcgagcagcaggatgcgggctctcagcgcgtagctgcggcg
cttgatgccaagccaggcatgaaagtgattgatgcttgcgcgggtgcgggcggtaaaacc
ttacacatagctgcgcaaatgcagggtaaaggacgcttgttggccatggatgtggagcaa
tggaaactcgacaaactcaaagagcgtgcccgtcgtaatggggcacacaatgtcgaaacc
cgtgttatcgccagcagtaaaaccattaaacgcttaaagctcagtgccgatagggtattg
cttgatgtgccttgctctggtttgggtgtattaaagcgtaatcccgatgcaaaatggcgt
gataccgtagagcgtttacctgtgttaatggaactgcaaaaacacattttgaacagttat
agccgcatggtcaaagtcggtggcatagtcgtctatgcgacttgttctatcttcccttgc
gagaaccgcggtcaagtggatgcgtttttagccgagaaccccaacttttgcctgattgag
gatgaaagtatcagcccagccgatagcggctttgatggcttttaccttgccaaacttgaa
cgtattcaagaataa
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