Shewanella sp. WE21: CKQ84_19535
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Entry
CKQ84_19535 CDS
T05404
Name
(GenBank) transcriptional regulator HexR
KO
K19337
RpiR family transcriptional regulator, carbohydrate utilization regulator
Organism
shew
Shewanella sp. WE21
Brite
KEGG Orthology (KO) [BR:
shew00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shew03000
]
CKQ84_19535
Transcription factors [BR:
shew03000
]
Prokaryotic type
Helix-turn-helix
Other families
CKQ84_19535
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_6
SIS
SIS_2
HTH_Tnp_ISL3
MarR
HTH_24
HTH_29
Penicillinase_R
HTH_Crp_2
DUF3640
Motif
Other DBs
NCBI-ProteinID:
AVI67844
LinkDB
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Position
complement(4383892..4384746)
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AA seq
284 aa
AA seq
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MNTLEKVQKSLTHFSKSERKVAEVILASPQTAIHSSIATLAKMADVSEPTVNRFCRRLDT
KGFPDFKLHLAQSLANGTPYVSRHVEEDDSTESYTTKIFESSMASLDTARQSLDISAINK
AVDILTQAKTISFFGLGASASVAHDAQNKFFRFNVPVICFDDVLMQRMSCINSNEGDVVV
LISHTGRTKSLIEIARLARENGAAVIGITARNSPLSMECTLPVTMEVPEDTDMYLPMASR
LAQLVTIDVLATGFTLRRGPRFRDNLKRVKEVLKESRINKDPIL
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgaataccctagaaaaggttcaaaaaagcctcacccattttagtaaatcagaacgcaaa
gttgcagaggtgatcttagcatcaccacagacagctatacattctagcatcgccacactg
gctaagatggcagatgtcagtgaacctactgtgaatcgtttctgccgccgcttagatact
aaaggtttccctgattttaagttacatctagcgcaaagtcttgcgaacggtacaccttat
gtgagccgccacgttgaagaagatgattcgactgagtcttatacgacaaaaatattcgaa
tcttcaatggcttcgctcgataccgcacgtcaaagcctagacatttcagccattaataaa
gccgttgatattctcactcaagctaagactatttccttttttggcctaggcgcatccgct
tcagttgcccatgacgcgcaaaataaattcttccgctttaatgtccctgtcatctgtttt
gacgatgttctaatgcaacgcatgagctgtattaacagtaatgagggcgatgtggtggta
ttgatttcccacactggccgtactaagtcattgattgaaatcgcgcgtttagcgagagaa
aatggtgcagctgtgattggtattaccgcccgcaactcgcctttgtcaatggaatgtaca
ctgcccgtgacaatggaagtgccagaagatactgacatgtatttacctatggcctcgcgt
ttagcccaattagtcactatagatgtattggcaacgggttttaccttacgtagaggccca
cgtttccgcgataatttgaaacgagtgaaagaagtgttaaaagagtctcgcatcaataaa
gatccgatactgtaa
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