Shewanella sp. WE21: CKQ84_20245
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Entry
CKQ84_20245 CDS
T05404
Name
(GenBank) multidrug transporter EmrD
KO
K08154
MFS transporter, DHA1 family, 2-module integral membrane pump EmrD
Organism
shew
Shewanella sp. WE21
Brite
KEGG Orthology (KO) [BR:
shew00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shew02000
]
CKQ84_20245
Transporters [BR:
shew02000
]
Major facilitator superfamily (MFS)
Drug transporters
Drug:H+ antiporter-1 (12 spanner) (DHA1) family [TC:
2.A.1.2
]
CKQ84_20245
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Motif
Pfam:
MFS_1
TRI12
Sugar_tr
Motif
Other DBs
NCBI-ProteinID:
AVI67967
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Position
4533893..4535125
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AA seq
410 aa
AA seq
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MSGTPHSPIHHDVAPAASQSSLLLMIVFMVASGQMAQTIFVPALPQIALGLHVDASQLQA
VMACYLLSYGMFQFVYGPVSDRVGRKMPLIVGIAIFVLGAVFAAKATSFNQLIMASLIQG
LGTASAGALCRSIPRDHYFGDRLVKFNSYVSMAVVFLPLLAPFIGSASAAYFGWQAVYWV
LAVFGVMVWLLLIFLFKESLPKAQREHQAVFKSYKHVLRHRAFRAYLFSLIATFAGIAAF
EAIAGVLYGQYLGLTPFMVSCYFVAPIPGYLLGALIAGRQNKPQRVVYQGVALLGAGALF
MLIPGLFNLVVGWSLLIGSILFFSGAGMLFPTLTSAALEPFPRQAGIAGALLGGLQNFGA
GLAALTMSLVPMGGQLSIGLLSAVMVVLVILSLYYAKDQNDTHQNLMPQI
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggcacgccacattctcctattcatcacgatgtcgctccagcggcgagtcagtct
agcctactgttaatgattgtctttatggtcgccagtggccaaatggcgcagacgattttt
gtacctgcccttccacaaatcgcactcgggctccatgtggacgccagccaactacaagcc
gtgatggcctgttacttactctcctacgggatgtttcaatttgtgtatggcccagtgtca
gatcgcgttggccgtaaaatgccactcatcgtgggtatcgcaattttcgttctaggcgct
gtgttcgcggcgaaggccacaagttttaaccaactgataatggcgagccttatccaagga
ttaggcacagccagcgcaggcgcattatgccggagcattccccgcgatcattactttggc
gaccgactggtaaaatttaatagctatgtctctatggctgtggtgtttttacctttgctt
gcaccatttatcggcagcgccagtgcagcctatttcggctggcaagccgtatactgggta
ttagcggtattcggtgtcatggtctggctgttgttaatattcctctttaaagagtcttta
cctaaggcgcaacgggaacatcaagccgttttcaaatcctataagcatgtcctacgccat
agagcgtttcgcgcttatttattttcattgatcgcaacctttgccggtattgccgctttt
gaagccattgctggcgtactctatggccaatatctcggactgacaccttttatggtcagt
tgttattttgttgcgccaattcctggctacttactgggggcactcatcgctggccgacaa
aataagccacaaagggttgtttaccaaggtgttgcgttactcggtgctggcgcattattt
atgttgatcccaggtctttttaatttagtggttggctggagtttacttattggatcgatt
ttattcttcagtggcgcaggcatgctgttccctaccctaacatctgctgcgttagaacca
tttccacgtcaggcggggattgcgggcgcattactggggggattacaaaattttggtgcc
ggacttgccgcattaactatgtctttagtgcctatgggcggccagttaagcataggttta
ttgagtgctgtaatggtagttttagtgattctgtctctgtattacgccaaagatcaaaat
gatactcaccagaatttaatgccacagatttaa
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