Shewanella sp. WE21: CKQ84_20290
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Entry
CKQ84_20290 CDS
T05404
Name
(GenBank) lipopolysaccharide assembly protein LapB
KO
K19804
lipopolysaccharide assembly protein B
Organism
shew
Shewanella sp. WE21
Brite
KEGG Orthology (KO) [BR:
shew00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99986 Glycan metabolism
CKQ84_20290
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Motif
Pfam:
Zn_ribbon_LapB
TPR_19
TPR_7
NRDD
ZZ
ARM_TT21_C
Motif
Other DBs
NCBI-ProteinID:
AVI67976
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Position
complement(4543546..4544706)
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AA seq
386 aa
AA seq
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MLEILFLLLPIAAAYGWYMGRRSIRQNQSNQRKQLSRDYFTGLNFLLSNESDKAVDLFIS
MLDVDDETIDTHLSLGSLFRKRGEVDRSIRIHQNLIARPTLTNEQRDIAMMELGKDYLAA
GFYDRAEEIFINLVSQDDHSEESETQLIAIYQVIKEWQKAIDITKRLSRKRQQVLKPLTA
HFYCQLADEASDDAQKIKLLQQALKQDPQCGRALLTLAKKFLDIQDYAQCKQMLLQLKKA
DIELFADAIPTAKQVYRDTQDKEGFQELLAGAMADGAGASVVVALAQHMISLDEIKAAET
IVLDALYRHPTMKGFQHLMQMHLRQAEEGQAKQSLTMLEQLVEQQIKFRPSYRCKECGFP
SHALYWHCPSCKNWGSIKRIRGLDGE
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgcttgagatcctctttctgttgcttcccattgctgccgcctatggttggtatatgggg
cgacggagcataaggcagaatcaaagtaatcaacgtaaacaattgagccgggattatttt
actggcctcaatttcttactgtcgaacgaatcggataaagccgtcgatttgtttatcagt
atgctagatgttgacgatgaaaccatagatacccatctgtcactcggttcgctgttccgt
aagcgaggcgaggtcgaccgctctattcgtatccatcaaaatttaatcgcgcggcctaca
ttaaccaatgagcagcgtgacatcgctatgatggagctgggtaaagattatctagcagca
ggtttttacgacagagctgaagaaatctttattaacttggtcagccaagacgatcacagt
gaagaatctgaaacacagctgattgctatctatcaagtgattaaagagtggcaaaaagcc
attgatatcactaagcgtttgagtcgtaaacgtcagcaagttttaaagccgttaacggcg
catttctattgccagttagccgatgaagccagtgatgatgcgcagaaaattaaactgcta
cagcaagcgctgaagcaagatccccaatgcggtcgtgcattattgaccctagcgaaaaaa
ttcctcgatattcaagattatgcccagtgtaagcaaatgctgctgcaactgaaaaaagcc
gatatcgagctttttgccgatgcgattccaacggccaaacaagtttatcgcgacacgcaa
gataaagaaggttttcaagaattactcgcgggcgccatggccgatggcgctggagcttct
gtggtggtcgccttagcgcagcacatgataagtcttgatgagattaaagcggcagagacc
atagtgctcgatgcgttatatcgccatccgaccatgaaaggttttcagcacttgatgcag
atgcatttgcgccaagccgaagaagggcaagctaagcaaagtttaactatgctagagcag
ctcgttgaacaacaaattaaattccgtccgagttaccgttgtaaggagtgtggttttcct
tcccatgcgctttactggcattgtccttcctgtaaaaactggggcagcattaaacggatc
cgaggcctagacggcgaataa
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