KEGG   Shewanella sp. WE21: CKQ84_20305
Entry
CKQ84_20305       CDS       T05404                                 
Name
(GenBank) 30S ribosomal protein S1
  KO
K02945  small subunit ribosomal protein S1
Organism
shew  Shewanella sp. WE21
Pathway
shew03010  Ribosome
Brite
KEGG Orthology (KO) [BR:shew00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    CKQ84_20305
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:shew03011]
    CKQ84_20305
Ribosome [BR:shew03011]
 Ribosomal proteins
  Mitochondria/ Chloroplast
   Small subunit
    CKQ84_20305
  Bacteria
    CKQ84_20305
SSDB
Motif
Pfam: S1 S1_RRP5 Spt6_S1 PCB_OB OB_RRP5_4th
Other DBs
NCBI-ProteinID: AVI67979
LinkDB
Position
complement(4545467..4547134)
AA seq 555 aa
MTESFADLFEQSLQTLEFRPGSIVRGTVVSIKNGMVLVDAGLKSESPIPAEQFKNAQGVL
EIQVGDEVDVALDSVEDGFGETQLSREKAKRHEAWIVLEKAYEDAETVIGIINGKVKGGF
TVELNGIRAFLPGSLVDVRPVRDTAHLEYKELEFKVIKLDQKRNNVVVSRRAVIESESSA
ERDALLENLQEGQAVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDE
INVKVLKYDRERTRVSLGLKQLGEDPWLEISKRYPENTRLTGRVTNLTDYGCFVEIEEGV
EGLVHVSEMDWTNKNIHPSKVVNLGDEVEVLVLDIDEERRRISLGLKQCKTNPWDDFATR
YNKGDKVSGKIKSITDFGIFIGLDGGIDGLVHLSDISWNGTGEDAVSEYKKGDEIHAVVL
SVDPERERISLGVKQTEDDPFNAYLADKKKGTIVNGTVSAVDAKGVTVELADTVEGYIRV
ADISRERIEDASTVYNVGDAIEAKFMGVDRKNRSISLSIKAKDEAEEKEVMATLNKQDDA
VISNAMAEAFKAARK
NT seq 1668 nt   +upstreamnt  +downstreamnt
atgactgaatcttttgctgatctatttgaacaatcccttcaaactctggaattccgtcca
ggctctatcgttcgtggtactgttgtatcaatcaaaaacggtatggtactggttgacgcg
ggtctgaagtctgaaagcccaatcccagctgaacaattcaaaaatgctcaaggcgtttta
gaaattcaagttggcgatgaagttgacgtagctcttgactctgttgaagacggcttcggt
gagactcaactgtctcgcgaaaaagcgaaacgtcatgaagcttggatcgttctggaaaaa
gcttatgaagatgctgaaactgtaatcggtatcatcaatggtaaagttaaaggcggtttc
actgttgaattaaacggtatccgtgccttcttaccaggttctctagttgacgtgcgccca
gttcgcgacaccgctcacttagagtacaaagaattagaattcaaagttatcaagctagac
cagaagcgtaacaacgttgttgtttctcgtcgtgcagttatcgaatcagaaagcagcgct
gagcgtgatgcactgttagaaaacctgcaagaaggtcaagcagttaagggtatcgttaag
aacctgactgactacggtgcattcgtagatttaggtggtgttgacggtctgctacatatc
acagatatggcgtggaaacgtgttaaacatccatcagaaatcgtcaatgttggcgatgaa
atcaacgttaaagtactgaagtacgatcgtgagcgcactcgtgtgtctctaggtctgaaa
caacttggcgaagatccatggttagaaatcagcaaacgctacccagaaaacacacgttta
actggtcgcgttactaacctaactgactacggttgcttcgtagaaatcgaagaaggcgtt
gaaggtctggttcacgtttctgaaatggattggactaacaagaacattcacccatctaaa
gtggttaacttaggtgatgaagttgaagttctggttctggacatcgatgaagagcgtcgt
cgtatttctctaggtctgaaacaatgtaagaccaatccatgggatgacttcgcaactcgt
tacaacaaaggcgacaaggtttctggtaagatcaagtcaatcactgacttcggtatcttt
atcggtcttgacggcggtatcgatggtctagttcacctgtctgacatttcttggaacggt
actggcgaagacgcagtttctgaatacaagaaaggcgatgaaatccatgcagtggttctg
tctgtagatccagagcgtgagcgcatcagcttaggtgttaagcaaactgaagatgatcca
ttcaacgcatacttggctgacaagaagaaaggtactatcgtaaacggtactgtttctgct
gttgatgctaaaggtgtgactgttgaactggctgacactgttgaaggttacatccgtgta
gctgacatttcacgtgagcgtatcgaagatgcatctactgtctataatgtaggtgatgca
atcgaagctaagttcatgggtgttgaccgtaagaaccgctctatcagcctgtcaatcaaa
gcgaaagacgaagctgaagagaaagaagtaatggcgactctgaacaaacaagatgacgct
gttattagcaatgcaatggctgaagcgtttaaagcagctcgtaaataa

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