Shewanella sp. WE21: CKQ84_20305
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Entry
CKQ84_20305 CDS
T05404
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
shew
Shewanella sp. WE21
Pathway
shew03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
shew00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
CKQ84_20305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
shew03011
]
CKQ84_20305
Ribosome [BR:
shew03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
CKQ84_20305
Bacteria
CKQ84_20305
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
PCB_OB
OB_RRP5_4th
Motif
Other DBs
NCBI-ProteinID:
AVI67979
LinkDB
All DBs
Position
complement(4545467..4547134)
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AA seq
555 aa
AA seq
DB search
MTESFADLFEQSLQTLEFRPGSIVRGTVVSIKNGMVLVDAGLKSESPIPAEQFKNAQGVL
EIQVGDEVDVALDSVEDGFGETQLSREKAKRHEAWIVLEKAYEDAETVIGIINGKVKGGF
TVELNGIRAFLPGSLVDVRPVRDTAHLEYKELEFKVIKLDQKRNNVVVSRRAVIESESSA
ERDALLENLQEGQAVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDE
INVKVLKYDRERTRVSLGLKQLGEDPWLEISKRYPENTRLTGRVTNLTDYGCFVEIEEGV
EGLVHVSEMDWTNKNIHPSKVVNLGDEVEVLVLDIDEERRRISLGLKQCKTNPWDDFATR
YNKGDKVSGKIKSITDFGIFIGLDGGIDGLVHLSDISWNGTGEDAVSEYKKGDEIHAVVL
SVDPERERISLGVKQTEDDPFNAYLADKKKGTIVNGTVSAVDAKGVTVELADTVEGYIRV
ADISRERIEDASTVYNVGDAIEAKFMGVDRKNRSISLSIKAKDEAEEKEVMATLNKQDDA
VISNAMAEAFKAARK
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgactgaatcttttgctgatctatttgaacaatcccttcaaactctggaattccgtcca
ggctctatcgttcgtggtactgttgtatcaatcaaaaacggtatggtactggttgacgcg
ggtctgaagtctgaaagcccaatcccagctgaacaattcaaaaatgctcaaggcgtttta
gaaattcaagttggcgatgaagttgacgtagctcttgactctgttgaagacggcttcggt
gagactcaactgtctcgcgaaaaagcgaaacgtcatgaagcttggatcgttctggaaaaa
gcttatgaagatgctgaaactgtaatcggtatcatcaatggtaaagttaaaggcggtttc
actgttgaattaaacggtatccgtgccttcttaccaggttctctagttgacgtgcgccca
gttcgcgacaccgctcacttagagtacaaagaattagaattcaaagttatcaagctagac
cagaagcgtaacaacgttgttgtttctcgtcgtgcagttatcgaatcagaaagcagcgct
gagcgtgatgcactgttagaaaacctgcaagaaggtcaagcagttaagggtatcgttaag
aacctgactgactacggtgcattcgtagatttaggtggtgttgacggtctgctacatatc
acagatatggcgtggaaacgtgttaaacatccatcagaaatcgtcaatgttggcgatgaa
atcaacgttaaagtactgaagtacgatcgtgagcgcactcgtgtgtctctaggtctgaaa
caacttggcgaagatccatggttagaaatcagcaaacgctacccagaaaacacacgttta
actggtcgcgttactaacctaactgactacggttgcttcgtagaaatcgaagaaggcgtt
gaaggtctggttcacgtttctgaaatggattggactaacaagaacattcacccatctaaa
gtggttaacttaggtgatgaagttgaagttctggttctggacatcgatgaagagcgtcgt
cgtatttctctaggtctgaaacaatgtaagaccaatccatgggatgacttcgcaactcgt
tacaacaaaggcgacaaggtttctggtaagatcaagtcaatcactgacttcggtatcttt
atcggtcttgacggcggtatcgatggtctagttcacctgtctgacatttcttggaacggt
actggcgaagacgcagtttctgaatacaagaaaggcgatgaaatccatgcagtggttctg
tctgtagatccagagcgtgagcgcatcagcttaggtgttaagcaaactgaagatgatcca
ttcaacgcatacttggctgacaagaagaaaggtactatcgtaaacggtactgtttctgct
gttgatgctaaaggtgtgactgttgaactggctgacactgttgaaggttacatccgtgta
gctgacatttcacgtgagcgtatcgaagatgcatctactgtctataatgtaggtgatgca
atcgaagctaagttcatgggtgttgaccgtaagaaccgctctatcagcctgtcaatcaaa
gcgaaagacgaagctgaagagaaagaagtaatggcgactctgaacaaacaagatgacgct
gttattagcaatgcaatggctgaagcgtttaaagcagctcgtaaataa
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