Shewanella sp. WE21: CKQ84_20350
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Entry
CKQ84_20350 CDS
T05404
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
shew
Shewanella sp. WE21
Brite
KEGG Orthology (KO) [BR:
shew00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shew03032
]
CKQ84_20350
03400 DNA repair and recombination proteins [BR:
shew03400
]
CKQ84_20350
Enzymes [BR:
shew01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
CKQ84_20350
DNA replication proteins [BR:
shew03032
]
Prokaryotic type
DNA Topoisomerases
CKQ84_20350
DNA repair and recombination proteins [BR:
shew03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CKQ84_20350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
AVI68771
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Position
complement(4556325..4559075)
Genome browser
AA seq
916 aa
AA seq
DB search
MTDLASSISPINIEDELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMSELKNDWN
KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYTLVDGQGNFGSVDGDSAAAM
RYTEIRMDKLAHQLLADLEKETVDFVPNYDGTEQIPAVLPTRVPNLLINGSSGIAVGMAT
NIPPHNLTEVVKGCLALIEEPSLSIEQLMEYIPGPDFPTAAIINGRKGIIDAYKTGRGRA
IMRALADVETEDNGRERIIVTEIPYQVNKARLIEKIAELVKDKKLEGISGLRDESDKDGM
RIVIEIKRGEVGEVVLNNLYAQTQMQCSFGINMVALTNGQPKLFNLKEMLECFILHRREV
VTRRTVFELRKARERAHILEALAVALANIDPIIALIKASPTPADAKVKLVEQGWELGHVQ
GMLEKAGDDAARPEWLEPQYGIRDGQYFLTEQQAQAILELRLHRLTGLEHDKIIAEYEEL
LEFIAGLLFILRSPERLMEVIKEELVQILEEYGDARRTVINANEVDMSLEDLINEEDVVV
TLSHLGYAKYQPLTDYQAQRRGGKGKAATKVKDEDFVEKLLVANTHDTILCFSDFGKMYW
LKVYQLPLASRTARGRPIVNLLPLSDGERITAILPVREYAADKYIIMATSHGTVKKTALT
AYSNPRANGIIAVNLKDGDQLIGVDITNGDDEIMLFSNEGKVVRFGEKVRDSETGEVKTD
PETGEEVLSLRPMGRTATGVRGIRLEEGQKVVSLIVPKGDGAILTVTENGYGKRTQLSEY
PAKSRATKGVVSIKVSERNGAVVGAVQVGLNDELMLISDKGTLVRTPASGVSIIGRNTQG
VTIIRTAGDEKVVGLQRIDEIQTEEDEVELDENGLPIVPVIVEGELADEALEEALDDEEE
LDEDEDELADDEQDEE
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atgactgatctggcatcatctatttcgccaattaatatcgaagacgaactaaagaattcg
taccttgattacgccatgagcgttatcgtgggacgtgcattaccagacgtgcgcgacggc
ttaaagccggttcatcgccgcgttctgtttgccatgagtgaattgaagaacgattggaac
aagccttacaaaaaatcagcccgtgtggtcggtgacgtcatcggtaaatatcacccccat
ggtgattctgctgtttatgacactatcgtccgtatggcccagccattctcactgcgttac
accttagtagacggccaaggtaacttcggttcggtcgacggtgactcagcggcggcaatg
cgttataccgaaatccgtatggataagttagcgcaccaattactagctgatcttgaaaaa
gagacagtggatttcgtccctaactacgacggcacagaacagatcccagctgtattacct
acacgcgtacctaacctgttaattaacggttcatcgggtattgcggtaggtatggcaacc
aacatcccaccacacaacctaacggaagttgtgaaaggctgtttggcattgattgaagaa
ccttcactgtcgattgaacagttgatggaatacattccaggtccggatttccccactgca
gcgattatcaacggccgtaaaggcattattgatgcctataaaactggccgtggccgcgcg
atcatgcgtgctctggcagatgtggaaaccgaagataatggccgtgagcgtataatcgtc
actgaaatcccatatcaagtaaacaaagcccgtttaatcgagaagattgccgagctggtt
aaagataaaaagcttgaagggatcagcggcctacgcgacgagtctgataaagacggtatg
cgtatcgttatcgaaattaagcgcggtgaagtgggcgaggttgtactaaataacctttat
gctcaaacgcaaatgcagtgttctttcgggattaacatggtggccctgaccaatggtcag
cctaaactgtttaaccttaaagaaatgctcgaatgctttattctgcatcgccgtgaagtg
gtgacgcgtcgtactgtattcgaactgcgtaaagcccgtgagcgtgcccatattttggaa
gcgctggcggttgcactggctaacattgacccgattattgcactgatcaaagcctcacca
acgcctgcggatgccaaagtgaaattggttgagcaaggttgggaattaggccacgttcaa
ggcatgctggaaaaagcgggcgatgacgccgcgcgtccagagtggttagagccacaatac
ggtattcgtgacggtcaatacttcctgactgagcaacaagctcaggccattctggaactg
cgtttgcaccgtttaaccggtcttgaacacgataagatcatcgccgaatacgaagaactg
ctcgaatttatcgcgggtctgctgtttattttgcgcagtcctgagcgtttgatggaagtg
atcaaggaagaattagttcaaatccttgaagaatatggtgatgcgcgccgtacagtgatc
aatgccaacgaagtcgatatgagtcttgaagacttgatcaacgaagaagacgttgtggta
acactgtcgcacttaggttatgccaagtatcaaccattgaccgattaccaagcccagcgc
cgtggtggtaaaggtaaagccgcgacgaaagtgaaagacgaagatttcgtcgagaagctg
ttagttgccaatacccatgacaccattttgtgcttctctgattttggtaagatgtactgg
ctcaaagtgtatcaactgccattagcgagccgtacggcccgtggtcgtccaattgttaac
ttgttgccgttatccgatggcgagcgcattactgcgattctgccagtacgtgaatacgct
gcggacaagtacatcatcatggcgacctcacacggtactgtgaagaaaaccgcactaact
gcttatagcaatccacgtgcaaacggtattatcgccgttaacctcaaagacggtgaccaa
ctgatcggtgtcgatatcactaacggtgatgacgaaatcatgttgttctcgaacgaaggg
aaagtggttcgctttggtgagaaagttcgtgattctgaaactggcgaagtgaaaaccgat
cctgaaaccggtgaagaggtcttgtccttacgtcctatgggccgtactgcaacaggcgtt
cgtggtatccgtttagaagaaggtcagaaagtcgtgtcgcttattgtacccaaaggcgat
ggcgcgattctgacagtgactgaaaacggttacggtaaacggactcaactgtctgaatac
cctgcgaagagccgtgcgactaaaggtgtggtttcaatcaaggtgagcgaacgtaacggc
gctgttgttggggctgttcaagtcggtcttaacgacgaactgatgcttatcagtgataaa
ggtaccttagtgcgtacacctgcgagcggcgtgtctatcattggccgtaacactcaaggt
gtaacgattatccgtactgcgggcgacgagaaagtggtcggcctacaacgtatcgacgaa
atccaaactgaagaagatgaagtcgaactggatgaaaacggtttaccgattgttcctgtc
attgtcgaaggcgaattagctgacgaggcgcttgaagaagcgctggatgacgaagaagag
ttggacgaagatgaagacgaacttgctgatgatgagcaagacgaagagtaa
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