KEGG   Shewanella sp. WE21: CKQ84_20950
Entry
CKQ84_20950       CDS       T05404                                 
Name
(GenBank) helicase
  KO
K03722  ATP-dependent DNA helicase DinG [EC:5.6.2.3]
Organism
shew  Shewanella sp. WE21
Brite
KEGG Orthology (KO) [BR:shew00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:shew03400]
    CKQ84_20950
Enzymes [BR:shew01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     CKQ84_20950
DNA repair and recombination proteins [BR:shew03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    CKQ84_20950
SSDB
Motif
Pfam: Helicase_C_2 DEAD ResIII DEAD_2 Helicase_C zf-AD T4SS-DNA_transf
Other DBs
NCBI-ProteinID: AVI68775
LinkDB
Position
complement(4697375..4699276)
AA seq 633 aa
MQRAFLPDGVLSKHIQGFSARTSQMQMAQEVSEAIAAKGNVVIEAGTGVGKTFAYLIPAI
LSGKQVIVSTGSKNLQEQLFFKDLPALVVMLGIEPKLALLKGRNNYLCQWRLDKQMSEAT
HIDARLLDDLLKINQWASTCKDGDIGGLTSVPENSSALPLVVSTKESCIGKRCDFYDVCF
TRKARSRALDAKIIVVNHHLFFADSVLKDTGFAELLPDPDVVIFDEAHLLPDICVNYFGQ
QCSSRTIDDFIQKLLAIYQTELSDTGQLAQFCQRCLAKLSDWHNQLYSCGESDWRLVLGN
KALAAASWDLLAELTALQNLLMAHIGRSELLDDIAIKLAELNNKLSVFFNCDNNLAAYSI
EFGSRFVVLRISPINIARECQQLFVPETSWIFTSATLQVNRSLVHFAREMGIVDAQQSIL
DSPFDYPRQAVFCVPRQLGSVTNQQQALKQLVDVCVQAIDTAQGRTFILFTSHKMLEQAA
LALRTRTQYPLLVQGQAGKQSLLTKFRQLGNAVLLGTSSFWEGVDVRGKLLSCVIIDKLP
FVSPDEPLYRARADNVSRQGLDPFTEVSLPQAIISLKQGVGRLIRDEKDRGVLILCDNRI
VNRYYGQAFLNSLPPMARTRDLEKALAFLRTIP
NT seq 1902 nt   +upstreamnt  +downstreamnt
gtgcaacgcgcatttttgcccgatggagtattgtctaaacatattcaagggtttagtgcg
cgaacaagccagatgcagatggcacaggaagtgagtgaggcgatagcggcgaagggcaat
gtggtgattgaggcgggtacgggggtaggtaaaacctttgcgtatttgatccccgcgata
ttgagcggtaagcaagtcatcgtcagtacgggcagtaaaaacttgcaagagcagttgttt
tttaaagacttacccgcgctggtcgtcatgttggggattgagcctaaactggctctacta
aagggccgcaataattatctgtgccagtggcgactcgataagcaaatgagcgaggcgaca
catatcgatgcgcgtttgttagatgatttgttgaaaatcaatcagtgggcgagcacctgt
aaagatggtgatattggtggtttaacctcagtgcctgagaattcctcggcgctgccgctc
gtggtcagcactaaggaaagctgtattggcaagcgctgcgacttttacgatgtctgcttt
actcgcaaggcgcgcagccgtgccctggatgccaaaatcattgtggttaaccaccattta
tttttcgccgatagcgtactgaaagacacgggctttgccgagttattacccgatcctgat
gtggtgattttcgatgaagcgcatttattacccgatatttgcgttaactattttggccag
caatgttcgagtcgtactatcgatgattttattcaaaagctactcgctatttatcagact
gaactcagtgatactgggcaactcgcccaattttgccagcgttgcctcgctaaattaagt
gattggcataatcagttatattcctgcggcgaatccgattggcgtttagtgctgggcaat
aaagcgctcgcggcggcgtcatgggatttattagcggaattaaccgcgctgcagaattta
ttaatggcccatattgggcgtagtgaattgttagatgatatcgccattaagttggcggag
ctgaataacaagctcagtgtgttttttaactgcgataataatctggcggcctacagcatc
gaatttggtagtcgctttgtggtgctgcgaatttcaccaatcaatattgcccgtgagtgc
caacaattatttgtgcccgaaaccagctggatatttacctcggcaactttgcaggttaac
cgcagtcttgttcattttgcccgagaaatgggtatcgtcgatgcgcagcaaagcattctc
gacagtcccttcgattatccccgccaagcggtattttgtgtgcctagacaacttgggagc
gtgaccaatcaacagcaagcgttaaagcagctggtggatgtgtgcgtgcaagcgatagat
acggcgcagggacggacttttattttatttaccagccataaaatgctcgaacaagcggcg
ctggcactgcgaactcgcactcagtatccgctgctggtacaaggccaagcgggtaaacag
agtctgctgactaagtttcgccaactcggcaatgcggtattgctcggcaccagtagtttt
tgggaaggggtggatgtgcgcggtaaattgttaagctgcgtgattatcgacaaattacct
tttgtgtcgcccgatgagcccctgtatcgcgcccgagccgacaatgtgagtcgtcaggga
ctcgatccttttactgaagtgtcgttaccgcaggcgattatttcgctgaaacaaggtgtt
ggccgtcttattcgcgatgaaaaagatcgcggtgtgctgatcctttgcgataatcgcatt
gtgaatcgctactatggccaagcctttttaaactcgctgccgccgatggcacgcacccgt
gacctagaaaaggcattggcattcttgagaacaatcccctga

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