Shewanella sp. WE21: CKQ84_21230
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Entry
CKQ84_21230 CDS
T05404
Name
(GenBank) isocitrate dehydrogenase (NADP(+))
KO
K00031
isocitrate dehydrogenase [EC:
1.1.1.42
]
Organism
shew
Shewanella sp. WE21
Pathway
shew00020
Citrate cycle (TCA cycle)
shew00480
Glutathione metabolism
shew00720
Other carbon fixation pathways
shew01100
Metabolic pathways
shew01110
Biosynthesis of secondary metabolites
shew01120
Microbial metabolism in diverse environments
shew01200
Carbon metabolism
shew01210
2-Oxocarboxylic acid metabolism
shew01230
Biosynthesis of amino acids
shew04146
Peroxisome
Module
shew_M00009
Citrate cycle (TCA cycle, Krebs cycle)
shew_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
shew00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
CKQ84_21230
09102 Energy metabolism
00720 Other carbon fixation pathways
CKQ84_21230
09106 Metabolism of other amino acids
00480 Glutathione metabolism
CKQ84_21230
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
CKQ84_21230
Enzymes [BR:
shew01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.42 isocitrate dehydrogenase (NADP+)
CKQ84_21230
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
IDH
HTH_39
RodZ_C
Motif
Other DBs
NCBI-ProteinID:
AVI68153
LinkDB
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Position
complement(4764810..4767035)
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AA seq
741 aa
AA seq
DB search
MKDNSSTIIYTETDEAPALATLSLLPIIRTFTDAAGVAVETRDISLSGRIIASFPEQLTE
AQKIGDHLTELGELANQPEANIIKLPNISASIPQLKACILELQQKGYDIPNYPDEPKTDA
EKSIKTRYDKIKGSAVNPVLREGNSDRRAPLSVKNFAKKNPHSMGKWAKDSKSHVAHMTD
GDFYGSEQSVTLSDAGSVNIVLTQKDGQEVVLKSGLKLLAGEIIDAAVLSKKALVSFYER
EIENAKAEDVLLSLHLKATMMKVSDPIMFGHAVKVFFKPVFDKHAALFAELGVDVNNGFG
DVYAKIATLPADSRAEVEADIAAVYAARPALAMVDSDKGITNLHVPSDIIIDASMPAAIR
SSGQMWGPDGQLHDTKAMIPDRCYAGIYQETIAFCKEHGAFDPKTMGSVPNVGLMAQKAE
EYGSHDKTFEIPADGVVNVVDASGKVLMSHNVEAGDIWRMCQVKDAPIRDWVKLAVRRAR
LSNTPAVFWLDSKRAHDAQIIAKVQQYLPEHDTDGLDISIMSPEDATRLSLARIKEGKDT
ISVTGNVLRDYLTDLFPILELGTSAKMLSIVPLMNGGGLFETGAGGSAPKHVQQLEKEGH
LRWDSLGEFLALAASLEHLSQTVGNPKAQVLADTLDQAIGQFLDSNKSPSRRVGELDNRG
SHFYLAMYWAQALAAQTGDEQLQAHFIPLAHALAANEQVIVAELATAQGAPVDLGGYYRL
DAAKAEKAMRPSETLNKLLIA
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgaaagataactcatcaacaattatttacactgaaacagacgaagcgccagcactggcc
accctctcactcttacctattatcagaacgtttaccgacgccgcgggcgttgcggttgaa
acccgtgatatctcgttatcgggccgtattattgccagtttccctgagcaactgaccgaa
gcacaaaagattggcgaccatctgacagagcttggcgagttagcgaatcagccagaagcg
aacatcatcaagttaccgaatatcagtgcttcgatcccacaattaaaagcctgtatcctt
gaactgcagcaaaaaggttacgacatccctaattatccggatgagccaaaaaccgacgct
gaaaagtcaattaaaacccgttacgacaagatcaaaggtagtgcggtaaacccagtactg
cgtgaaggtaactcagatcgccgtgccccattatcggtgaaaaacttcgccaagaaaaac
ccgcattccatggggaaatgggccaaagattccaagtcacacgttgctcacatgactgac
ggcgatttctacggcagcgagcagtctgtcactttatctgatgcgggcagcgtgaatatc
gtgctgacccaaaaagatggtcaagaagtggtgctcaaatcgggtcttaagctgctggct
ggcgaaatcatcgatgctgcggtgttgagtaaaaaagccttagtgagcttctatgagcgt
gaaatcgaaaacgccaaagcagaagatgtgctgttatcgctgcatctgaaagccactatg
atgaaagtgtctgatcctattatgtttggtcacgctgtgaaggtattcttcaagccagta
tttgacaaacatgcggcgcttttcgctgaattaggcgtagatgttaacaacggttttggt
gatgtttatgccaaaatagcgacattacctgctgatagccgcgccgaagtcgaagccgat
atcgccgccgtttacgctgcgcgtcccgcattggctatggttgattctgacaaaggtatc
accaacttacacgtgccaagcgacatcattatcgatgcgtctatgcctgctgcgattcgt
tcatctggccaaatgtggggaccagacggtcaactgcatgacactaaagccatgatccca
gatcgttgttatgccggtatctaccaagaaacgattgctttctgtaaagagcacggcgct
tttgatcctaaaaccatgggcagcgtgccaaacgtgggcttgatggcgcaaaaagccgaa
gagtacggcagccacgataagacctttgaaattcctgctgacggtgtggtcaacgttgtt
gatgccagcggtaaggtattgatgagccataacgtcgaagcgggcgatatctggagaatg
tgtcaagttaaagacgcacctatccgtgattgggtcaaactggccgtgcgccgtgcccgt
ttaagcaatactccagcggtattctggttagatagcaaacgtgcccacgatgcgcaaatc
attgcaaaagtgcagcagtatctgccagagcatgatactgatggcttagacatcagcatt
atgtctccagaagatgctacgcgtttgtctttggctcgcatcaaagaaggcaaagatacc
atttcagttacgggtaacgttctacgtgactacctgactgacttgttccccatcctcgag
ctaggcaccagtgccaaaatgctgtcaatcgttccattaatgaacggcggcggtctattt
gaaacaggtgctggcggtagtgcacctaaacacgtgcaacagcttgagaaagaaggtcac
ttacgttgggattcgctcggtgaattcttggctctggcagcgtctcttgagcatttaagc
caaaccgtgggcaatccaaaagcccaagtgttagccgatacgttagatcaagccattggc
caattcttagatagcaataaatcgccatcaagaagagtcggtgagctggataaccgtggc
agtcatttctacttagccatgtactgggcacaagccttagcagcgcaaacgggcgatgag
cagttacaagctcacttcattccgttagcgcatgcgctagcggcgaatgagcaagtgatt
gtggctgaattagcgacggcacaaggtgcaccagtcgatttaggcggttactaccgttta
gatgcggctaaggctgaaaaagccatgcgcccaagcgagacgttgaacaagctgttgatt
gcttaa
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