Shewanella sp. WE21: CKQ84_21440
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Entry
CKQ84_21440 CDS
T05404
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
shew
Shewanella sp. WE21
Pathway
shew00020
Citrate cycle (TCA cycle)
shew00190
Oxidative phosphorylation
shew00650
Butanoate metabolism
shew00720
Other carbon fixation pathways
shew01100
Metabolic pathways
shew01110
Biosynthesis of secondary metabolites
shew01120
Microbial metabolism in diverse environments
shew01200
Carbon metabolism
Module
shew_M00009
Citrate cycle (TCA cycle, Krebs cycle)
shew_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
shew_M00149
Succinate dehydrogenase, prokaryotes
shew_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
shew00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
CKQ84_21440
00650 Butanoate metabolism
CKQ84_21440
09102 Energy metabolism
00190 Oxidative phosphorylation
CKQ84_21440
00720 Other carbon fixation pathways
CKQ84_21440
Enzymes [BR:
shew01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
CKQ84_21440
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
DAO
GIDA
Pyr_redox_2
FAD_binding_3
FAD_oxidored
Thi4
Motif
Other DBs
NCBI-ProteinID:
AVI68191
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Position
complement(4815042..4816808)
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AA seq
588 aa
AA seq
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MSIPVREFDAVVIGAGGAGMRAALQISKEGKSCALLSKVFPTRSHTVSAQGGITVALGNA
HEDHWEQHMYDTVKGSDFIGDQEAIEFMCKTGPEAVIELEQMGLPFSRFENGTIYQRPFG
GQSKNFGGEQAARTAAAADRTGHALLHCLYQQNVKHKTQVFSEWYALDLVKNDDGAVVGC
TAIEIETGDIVYFKAKATILATGGAGRIYASTTNAHINTGDGVGMAMRAGVQMQDMEMWQ
FHPTGIAGAGVLVTEGCRGEGGYLLNKDGERFMERYAPNAKDLASRDVVARSMMTEIREG
RGLDGPLGPHCLLKLDHLGKETLEARLPGVCELSRTFAHIDPADGPIPVLPTCHYMMGGL
PTKVSGQVIRKNEDGTEQDVIGLFAVGEIACVSVHGANRLGGNSLLDLVVFGRAAGQHLG
KALDETDDPKDASDADIAASLARLNRWESNKDGEDPAQIRKDLQLCMQLNFSVFRRGDAM
AEGLEQLKVIRERLANAKLSDNSREFNTQRIECLELDNLMATAIATAYAANFRTESRGAH
SREDYLERDDENWLCHSLFDPITETMDRRAVNMAPKLREAFPPKKRTY
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
gtgagtattccagtacgcgaatttgatgctgtagtgatcggtgccggtggcgctggtatg
cgtgcagcgctgcagatttccaaagaaggtaaaagctgtgcgcttttatcaaaagtattc
ccaacccgttctcataccgtatctgcgcagggtggtatcactgttgcgttaggtaacgcc
catgaagatcattgggaacaacacatgtacgataccgtgaaaggttccgattttatcggt
gaccaagaagcgatcgagttcatgtgtaaaaccggtcctgaagccgtgattgaacttgag
caaatgggtttgcctttctctcgtttcgaaaatggtacgatttaccaacgtccatttggt
ggtcaatctaagaactttggtggcgagcaggctgcgcgtactgcggcagctgccgaccgt
actggtcatgctttgcttcactgtttataccaacaaaacgttaagcataagacgcaagtc
ttctcagaatggtatgcattagatctcgttaaaaacgatgatggcgccgttgtgggttgt
actgcgattgaaattgaaacaggcgatatcgtttatttcaaagccaaggcaacgattcta
gcgacgggtggtgcaggacgtatttacgcctctaccactaacgcgcatatcaacaccggt
gacggcgtcggtatggcaatgcgtgctggcgtgcaaatgcaagacatggaaatgtggcaa
ttccacccaactggcatcgccggcgcgggtgtacttgtgactgaaggttgtcgtggtgaa
ggcggttatctgctgaacaaagacggcgagcgtttcatggagcgttatgcccctaacgcg
aaagatttggcatcacgtgacgtggtagcacgttcaatgatgactgaaatccgcgaaggt
cgtggtttagacggtccattaggcccacactgtttactgaagcttgatcacttaggtaaa
gaaacattagaagcacgtttaccaggcgtgtgtgaattgtctcgtacttttgcacatatc
gatccagccgatggtccaattccagtactaccaacgtgtcactatatgatgggcggtcta
ccaactaaggtcagtggtcaagttattcgtaagaatgaagacggcactgaacaagatgtt
attggtctgttcgctgtgggtgagattgcctgtgtatctgttcacggtgcaaaccgttta
ggtggtaactcactgcttgatttagtggtctttggccgcgcagcgggtcagcatttaggt
aaagctttggatgagactgacgatccaaaagatgctagcgatgcggatattgctgcctct
ctggcgcgtctgaatcgttgggaaagcaacaaagatggcgaagatccagcgcaaatccgt
aaggatctgcaactgtgtatgcaattaaacttctctgtattccgtcgtggcgatgctatg
gctgaagggttagagcagttgaaagtgattcgtgaacgtcttgcaaatgctaaattgtct
gataactctcgtgaattcaatactcaacgtattgaatgtttagagttagataacttgatg
gcaacggcaatcgccacggcttatgcggctaacttccgtactgaaagccgcggtgctcac
tcacgtgaagattatttagagcgtgatgatgagaactggttatgccacagcttatttgac
ccaatcactgaaacgatggatcgtcgtgcagtgaacatggcacctaagttacgtgaagca
ttcccgccgaagaaacgtacctactag
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