Shewanella sp. WE21: CKQ84_21680
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Entry
CKQ84_21680 CDS
T05404
Name
(GenBank) chemotaxis protein
KO
K03406
methyl-accepting chemotaxis protein
Organism
shew
Shewanella sp. WE21
Pathway
shew02020
Two-component system
shew02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
shew00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CKQ84_21680
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
CKQ84_21680
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
shew02035
]
CKQ84_21680
Bacterial motility proteins [BR:
shew02035
]
Flagellar system
Chemotaxis proteins
MCPs
CKQ84_21680
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCPsignal
HAMP
4HB_MCP_1
TarH
DUF5527
Motif
Other DBs
NCBI-ProteinID:
AVI68232
LinkDB
All DBs
Position
complement(4872061..4873701)
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AA seq
546 aa
AA seq
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MFKSMTIIQKMTTVFFILSLLVLGLAWFSVIQLASLHSNTTKITENLIPSIRASAQMHVA
LLDARRAELNMVIDVMKQDSAALEISKQRFETAKREFEIADKKYAKLDFVSEQDKQQFTE
LGIAAEKYFAAHSSLVTAIEKGDMASANVMIKTVTKQTLEEAGEETANLRNENDRAAQEM
AISSESAYKTAKMLSIIVGLGTIFFVLAMALLLIRQIKNPIMLLLKQTEQVSAGNLTNKL
DMNMFARDEFGQLADSFNEMQDNLRMLVSEVSNSVVQLSSAAEEISAVALQSSNNMETQQ
NELNQLATAMHEMQATVQDVARNTNDAANAATQASGTATQGSETVNDSIVRIDKVAGAIE
ATAVVIRKLGDDSRNIGMVLEVIQGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRT
LAKRTQDSTSQINSIISELQLRASEAGNTMQQSQAMMIETVNKAKEAGESIAKISGSVSS
ISQMNIQIATATEEQGAVSEELNRNVANISDASEEVATGAKQMAMACNDLNHLATQLQDV
VRKFRI
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaaagcatgacaataatacaaaaaatgaccacagtgttttttatcctttcttta
ctggtgttgggattggcttggttttcagtcattcaacttgccagcttgcatagtaatacg
actaagattactgaaaacctaatcccttctattcgtgcatctgctcaaatgcatgttgca
ttacttgatgctcgacgtgctgaattaaatatggtaattgacgtgatgaaacaggactct
gctgccctggagattagtaagcaacgctttgagacagctaagcgcgagtttgaaatcgct
gacaagaaatatgccaaactagattttgtatcagagcaagacaaacaacaatttacagaa
cttggcatcgctgcagaaaaatatttcgctgcacactcatcattggtgacagccattgaa
aaaggggacatggcgagtgcaaatgtgatgatcaaaacagtgaccaaacaaactttggaa
gaggctggagaagaaactgcgaatttacgaaatgaaaatgatcgcgcagcacaggagatg
gcgataagtagtgagtcagcctataaaacagccaaaatgctcagcattatagtgggactt
ggtacaatattttttgtactagcgatggcattactgttaatccgtcagataaaaaatccc
ataatgttgttgttaaagcaaactgaacaggtatcagctggtaacttgaccaataagctc
gacatgaatatgtttgcccgtgatgagtttggtcaactggcagatagctttaatgagatg
caagataacttgcgcatgctggttagtgaggtttccaactctgtagtgcaacttagctct
gcggccgaggagataagcgctgttgctttgcagtcatccaacaatatggaaactcagcaa
aatgagctaaaccagttagccactgcgatgcatgagatgcaagctaccgtacaagacgtc
gctcgaaataccaacgatgccgccaatgcagcgacacaggcaagtggcactgcgacgcaa
ggtagtgaaacagttaatgactcgattgtgcgtattgataaggtcgctggagcgatagaa
gctaccgcggtagtgatccgtaaattgggagatgatagccgtaatattgggatggtattg
gaggtgatacaaggtattgctgaacaaactaacttgttggcgctgaacgcggccattgaa
gctgctagggcaggtgaacagggtagagggtttgctgtcgtggcagatgaggtgcgaacg
ctagccaaacggacacaggactccacttctcaaatcaatagcatcatttctgaattgcag
ttacgggctagtgaagctgggaatactatgcaacagagccaagctatgatgattgagact
gttaacaaagctaaagaggccggagaatcgattgcgaaaatcagcggttcagtgagcagt
atttctcaaatgaatattcagattgctaccgcgacagaagaacagggcgcggtaagtgaa
gagctaaaccgtaatgtcgcaaatattagcgacgcttctgaagaggtggctactggtgcg
aaacagatggcgatggcatgtaacgatctgaatcatttagccacgcagttgcaggatgtt
gtgaggaaatttcgtatttaa
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