Shewanella sp. WE21: CKQ84_21880
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Entry
CKQ84_21880 CDS
T05404
Name
(GenBank) marine proteobacterial sortase target protein
KO
K07114
Ca-activated chloride channel homolog
Organism
shew
Shewanella sp. WE21
Brite
KEGG Orthology (KO) [BR:
shew00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shew02000
]
CKQ84_21880
Transporters [BR:
shew02000
]
Other transporters
Pores ion channels [TC:
1
]
CKQ84_21880
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VIT
VWA_3
VWA_2
VWA
VIT_2
VWA_CoxE
Gram_pos_anchor
Motif
Other DBs
NCBI-ProteinID:
AVI68269
LinkDB
All DBs
Position
complement(4902502..4904808)
Genome browser
AA seq
768 aa
AA seq
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MITGKRVKEVSEAVAVLLISAAVCWGLPFVALASPNSTGTLSAPQNMASALVGQHNTESH
IINYDDITQGLLLYRQPSGAWVPSLPLDTQVLMQVSGLSNRVSVKQVFRNNTEFVLNGQY
LFPLPNEAAVDSLRLHIGQRVIEGQIHPKADAKQIFEQAKAEGKRASLVSQERPNMFTTE
VANLAPQEELIVEISYQETIKYEDGLFSLRFPLVVAPRYIPGLTSDSSVSDSHDPMAQVR
QSSRVTSSQVFDADRIVAPVRDGASGRDPVLKADIQVLLAKGVDKASIDSPYHDIKLKQD
NSGAVDVSLAQRVPANRDFVLQWRVQQGTSPMAWVFNQQGKTHKLDGENLSQDTLETNKT
SGVNDDNYSLVMVLPPKVEKSTQPSLPRELILVIDTSGSMAGDSIVQAKNALLYALKGLK
PEDSFNIIEFNSSLSQFSAVPLPATSSNLSRARQFVSRLQADGGTEMALALDAALPKSLG
SVSLDATQPLRQVIFMTDGSVGNEQALFDLIRYQIGESRLFTVGIGSAPNSHFMQRAAEL
GRGTFTYIGKVDEVDEKISALLSKIQYPVLTDIQVRFDDGSVPDYWPSPIADLYRGEPVL
VSLKRSAREPQELVISGRQGHQNWQQSLSLQDNSAGLMTHQGAGLDLLWARKQIGALELS
KNGANDDKVKQQVMALSMNYHLVSAYTSLVAVDLTPIDSTAMSRDAVVRQHLPLGWQPFG
ALPQTSTSSRLDMLLGALTLLLALILTGSIVRQRREEKAALVALTSER
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atgatcacagggaaaagggtaaaagaagtgagtgaagcggtagcggtattgctgatcagc
gccgccgtgtgttggggtttgccctttgtggcattggcttcgcctaatagtaccggcaca
ttgtctgcgccacagaatatggcttcggcattggtcgggcaacataacacagagtcacac
atcattaattacgatgatattacgcaggggctgttgctttatcgccagccgagcggtgcg
tgggtgccatctttgccgcttgatacacaagtgttgatgcaagtctctggcttaagtaat
cgcgtgagcgtgaaacaggtttttcgcaacaacactgaatttgtgttgaatgggcaatat
ttgttcccgctgcccaatgaggctgcggtggattcgttgcgattacatataggccagaga
gtgatcgaagggcaaattcatcctaaggccgatgccaagcagatttttgagcaagcgaaa
gctgaaggcaaacgtgccagcttagtgagccaagagcggcctaatatgttcacgaccgaa
gtcgcaaacctagcacctcaagaggagctgattgtagaaatcagctatcaggagaccatt
aaatatgaagatggtttgtttagtttacgttttccgctggtggtcgcgccccgttatatt
ccgggattaacatcggattcaagtgtaagcgattcacatgatcctatggcacaggtgcgc
caatcaagccgagtgacaagttcgcaggtgtttgatgctgaccggattgtggcaccagtg
cgggacggcgccagtggacgcgatcctgtgctgaaggcagacattcaagtcttactcgca
aagggggttgataaagcgtccattgatagtccttaccatgacatcaaactcaagcaagac
aacagcggcgcggtcgatgtatcgctggcgcaacgtgtgcccgctaatcgggattttgtg
ctgcaatggcgagtacagcagggcacgagcccaatggcttgggtgtttaatcagcaaggt
aaaacccataagctcgatggcgaaaatctgtctcaggatacacttgagacaaataaaacc
agcggcgtaaatgatgataattacagtctcgtcatggtgttgcctcctaaggttgaaaag
agtactcagccgagtttgccccgtgaattaattttagtgattgatacttcgggctctatg
gcgggggattctatcgttcaagctaaaaatgcactgttatacgcgttaaaaggactgaag
ccggaggacagttttaacattatcgaatttaactccagtttgtctcagttctcagcagtg
ccattaccggcgacctcgtcgaatttgtcacgggcccgtcaatttgtgagccgtttacag
gccgatggtggcactgaaatggcgttggcactggatgctgccttgccaaaatccttgggc
agtgtatcgcttgatgcaacgcagcctttgcgccaagtgatctttatgaccgacggctct
gtgggcaatgaacaagcgttatttgatttgatccgttatcaaataggtgaaagccgacta
tttactgtcggtataggttcggcgcctaattctcactttatgcaaagggcggctgaactc
ggtcgtggcacttttacctatattggcaaagtggatgaagtcgatgagaagatcagcgcc
ttactgagcaaaattcaatatccggtgttaaccgatattcaagtgcgttttgatgatggc
agtgtgcccgattactggccatcaccgattgctgatctgtaccgcggtgagccagtgctc
gtgagtttaaagcgcagcgcccgtgagccacaggagttagtgatttcaggacggcaaggg
catcaaaactggcaacagtcgctctcgctgcaggataactccgcaggattgatgactcat
caaggtgcgggtttagatttgctgtgggcgcgtaaacagattggtgcattggagttgagt
aaaaatggcgcgaatgatgacaaggtcaaacagcaagtgatggccttatcaatgaattat
cacttagtcagcgcctataccagcttagtggcggtggacttaaccccaattgattcaact
gcaatgagccgtgatgccgtggttcgtcagcacttgcccttaggttggcaaccttttgga
gccttgccgcaaacctcgacgtcaagccgtttggatatgttattaggtgcactgaccttg
ctactcgctttgattcttacgggatcgattgttcgacaaagacgggaagagaaggcggcc
ttggtggcacttaccagtgaacgatga
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