Shewanella sp. WE21: CKQ84_23370
Help
Entry
CKQ84_23370 CDS
T05404
Symbol
pspF
Name
(GenBank) phage shock protein operon transcriptional activator
KO
K03974
psp operon transcriptional activator
Organism
shew
Shewanella sp. WE21
Brite
KEGG Orthology (KO) [BR:
shew00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shew03000
]
CKQ84_23370 (pspF)
Transcription factors [BR:
shew03000
]
Prokaryotic type
Other transcription factors
Others
CKQ84_23370 (pspF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_5
HTH_8
Mg_chelatase
AAA_2
AAA
bpMoxR
AAA_16
HTH_28
HTH_Tnp_ISL3
HTH_23
AAA_7
AAA_22
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AVI68531
UniProt:
A0A2R3F0P0
LinkDB
All DBs
Position
5195973..5197064
Genome browser
AA seq
363 aa
AA seq
DB search
MDNKFQQDNLIGQSNALLEVLEHVSQIAPLSKPVLIIGERGTGKELIAERLHYLSKRWDQ
SFVKLNCSSLSENLLESELFGHESGAFTGAKGKHEGRFERADGGTLFLDELANTSGLIQE
KLLRVIEYGEFERVGGSKTVQADVRLICAANEDLPSLADAGEFRADLLDRLAFDVITLPP
LRCRPEDIMTLAEYFAVGMARQLKLQLFSGFSAHAVEQLMTHDWPGNIRELKNVVERSVY
RNGGENRPIDHITLDPFASPYRPKTRIKTRERQITSVAPTTVASTPQSAPTFEAEVQVNT
ECSTNCFNFPLDFKEQTEKYEMDLIQQALSNSQYNQKKTADMLGLSYHQLRGILKKYNLL
DKA
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
gtggataataaatttcagcaagacaacctcatcggtcaatccaacgccctactcgaagtg
ttagaacatgtgtcgcaaatagcgcctctatctaaacccgtactgattattggtgaacgt
ggtacaggtaaagagcttattgccgaacgcttacattatctgtctaagcgctgggatcaa
agttttgttaagctaaactgttcatctttgagtgaaaatttactcgagagtgaattattt
ggccatgagtcaggagcctttactggcgccaaaggcaaacacgaaggccgctttgagcgc
gccgacggcggcaccttattcctcgacgaattagccaacacttcaggacttatccaagaa
aagctcctacgcgttattgaatatggcgaatttgagcgggtcggcggcagtaaaaccgtg
caggctgatgttcggttaatctgcgccgccaacgaagatttaccatcacttgctgacgca
ggcgaatttcgtgccgacttgctcgatagactcgccttcgatgtaatcactctgccccca
ctgcgttgccgcccagaagacataatgacgctggcggaatatttcgccgttggcatggcg
cgccaattaaagctgcagctgttcagcggtttcagcgcccatgcggtcgagcaattaatg
acccacgactggccgggtaatatccgtgaacttaaaaacgttgtagagcgcagcgtttac
cgtaatggcggtgaaaatagacccatcgatcatattaccctcgatccctttgcttcaccg
tatcggcctaaaactcggatcaagacccgcgaacgtcaaatcacctcagtcgcgccaaca
actgttgccagtacgccacaatctgcgccgacatttgaggctgaagtgcaagtcaatact
gagtgttcaacgaattgctttaattttccgctggattttaaagagcaaactgagaagtac
gaaatggatctgatccagcaggcactctcaaacagccaatataaccaaaagaaaaccgcc
gacatgctcggattaagctaccaccaactgcgtggcatccttaaaaagtacaatttactt
gataaagcataa
DBGET
integrated database retrieval system
