Shewanella sp. YLB-09: FS418_04110
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Entry
FS418_04110 CDS
T11533
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
shey Shewanella sp. YLB-09
Pathway
shey00300
Lysine biosynthesis
shey00470
D-Amino acid metabolism
shey01100
Metabolic pathways
shey01110
Biosynthesis of secondary metabolites
shey01120
Microbial metabolism in diverse environments
shey01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
shey00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
FS418_04110 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
FS418_04110 (dapF)
Enzymes [BR:
shey01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
FS418_04110 (dapF)
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Paralog
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
CntK_N
DHODB_Fe-S_bind
Motif
Other DBs
NCBI-ProteinID:
QFU21127
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All DBs
Position
984405..985247
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AA seq
280 aa
AA seq
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MIHFTKMHGLGNDFMVVDGVTQNVFFSPEQIKRLSDRKFGIGFDQLLLVEPPYDPDLDFH
YRIFNADGGEVEQCGNGARCFARFVRNKGLTNKQKIRVSTSNGKLTLRLEHNGNVTVNMG
IPVLEPSKIPFNAKRPEKTYLLQTGGGDTQMQTFLCGAVSMGNPHCVLDVEDIETADVEG
VGELLTQNERFPKGVNVGFMQVINSGHIKLRVYERGTGETLACGTGACAAAVVGQLQGKL
EQSVRVDLPGGSLTINWEGEGKPLWMTGPAEHVYDGQIQT
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
ttgatccatttcactaaaatgcatggtctaggcaatgactttatggtcgtcgatggggta
acacagaatgtgttcttttcacccgagcagataaagcgcctgtccgaccgaaagtttggt
atcggtttcgatcaattgcttttggtggagcctccctatgatcccgatctcgattttcat
tatcgtatctttaatgcagatgggggggaggttgaacaatgtggtaacggtgctcgctgt
tttgctcgtttcgtgcgaaataaaggattgaccaacaaacaaaaaattagagtcagcacc
tcaaatggcaagctcaccttgcgattagagcataatggcaatgtcacggttaatatgggc
attccagtactcgaaccgagtaaaatcccattcaacgccaaaagacctgaaaaaacttac
ctgctacaaaccggtggtggcgatactcagatgcagacctttctttgtggtgctgtctct
atgggaaatccacattgtgtattggatgttgaggatattgagactgctgacgttgaaggt
gtcggtgagctactgactcaaaatgagcgttttccgaaaggcgtcaacgttggatttatg
caagtgattaactcggggcacatcaagctacgtgtttatgagcgaggtacaggggaaacg
ttagcttgtggcactggtgcatgtgcagctgccgtcgtcggtcagttacagggcaagctt
gaacagagtgtccgtgttgacctgccgggagggagtttaaccatcaattgggagggggaa
ggtaagccattatggatgacaggccctgcagagcacgtatatgacggacagatacaaaca
tga
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