Shewanella sp. YLB-09: FS418_06045
Help
Entry
FS418_06045 CDS
T11533
Symbol
xerD
Name
(GenBank) site-specific tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
shey Shewanella sp. YLB-09
Brite
KEGG Orthology (KO) [BR:
shey00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
shey03036
]
FS418_06045 (xerD)
Chromosome and associated proteins [BR:
shey03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
FS418_06045 (xerD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Tyr_recomb_halo_M
Integrase_1
Phage_int_SAM_4
Motif
Other DBs
NCBI-ProteinID:
QFU21473
LinkDB
All DBs
Position
1458321..1459238
Genome browser
AA seq
305 aa
AA seq
DB search
MVELAESKKYQADPLIDIFLDDLWSSRGLSDNTLAAYRTDLRHFDRYVQDANSDLTLVSQ
QLVRDYLDVRLEKGFARTSSARLMSSLRRFYQFLLLRKLIQVDPIAQIKSPKLARKLPDS
LSEQDVDNLLNEPNADDPLECRDRAMLELLYATGLRVTELVSLTMEQLSLRQGLVRVVGK
GGKERLVPLGELAITEVEGYLQGARAELLKGKLSDVLFPSKRAQMMTRQTFWHRIKLYAL
RAGISTHISPHTLRHAFATHLLNHGADLRVVQLLLGHSDLSTTQIYTHVAKARLSQLHSE
HHPRG
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
ttggttgaattagcggaatcgaaaaaatatcaggcagacccacttatcgatatttttctc
gatgatctttggtcgagccgtgggctcagtgacaatacgctagccgcctatcgtaccgac
ctacgtcatttcgaccgctatgtgcaggatgctaattctgatttaactctggtatctcaa
cagctggttcgagattatctcgatgtaaggttagaaaaaggttttgcgcggactagcagt
gcacggttaatgagtagccttaggcgattttatcagttcctgctgctcagaaagctgata
caagttgaccctattgctcagatcaaatcacctaaattggcaagaaagttgcccgactcc
ttaagcgagcaagatgtcgataatttgcttaatgaacccaatgcagacgatcccttagag
tgccgtgacagggcgatgttagagctactctatgctaccgggctacgcgtgacagagctg
gtaagtttgactatggagcagcttagcctgaggcaaggtttagtgagggtcgtaggtaaa
ggaggcaaggagcgattggtgcctttaggggagctggccattactgaagttgaaggctac
ctgcaaggggcaagagctgaattactcaagggtaaactgagcgatgtgttatttccctct
aaacgtgcgcagatgatgacaaggcagacgttttggcatcgaattaagctctatgcgcta
agagcgggcatatctactcatatttccccccataccttgaggcatgctttcgcgacacac
ttactgaaccatggcgccgatctgcgtgtggtgcagctattattgggccacagcgatctt
tcaacgactcagatctacacccacgtggctaaagccagattgagccagctacacagtgag
catcatcctaggggttag
DBGET
integrated database retrieval system
