Shewanella sp. YLB-09: FS418_10775
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Entry
FS418_10775 CDS
T11533
Symbol
sucC
Name
(GenBank) ADP-forming succinate--CoA ligase subunit beta
KO
K01903
succinyl-CoA synthetase beta subunit [EC:
6.2.1.5
]
Organism
shey Shewanella sp. YLB-09
Pathway
shey00020
Citrate cycle (TCA cycle)
shey00640
Propanoate metabolism
shey00660
C5-Branched dibasic acid metabolism
shey00720
Other carbon fixation pathways
shey01100
Metabolic pathways
shey01110
Biosynthesis of secondary metabolites
shey01120
Microbial metabolism in diverse environments
shey01200
Carbon metabolism
Module
shey_M00009
Citrate cycle (TCA cycle, Krebs cycle)
shey_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
shey00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
FS418_10775 (sucC)
00640 Propanoate metabolism
FS418_10775 (sucC)
00660 C5-Branched dibasic acid metabolism
FS418_10775 (sucC)
09102 Energy metabolism
00720 Other carbon fixation pathways
FS418_10775 (sucC)
Enzymes [BR:
shey01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
FS418_10775 (sucC)
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Motif
Pfam:
ATP-grasp_2
Ligase_CoA
Citrate_synth_N
ATP-grasp_5
GARS_A
DUF3843
NUC153
Motif
Other DBs
NCBI-ProteinID:
QFU22316
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Position
2565577..2566743
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AA seq
388 aa
AA seq
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MNLHEYQAKALFAEYGLPVSEGFACDTPQEAVEAAGRIGGDTWVVKCQVHAGGRGKAGGV
KVTSSKDEIRAFAEHWLGKNLVTYQTDEKGQPVAKILVETCTDIANELYLGAVVDRASRR
VVFMASTEGGVDIETVAENTPELIHKAIIDPLTGPQPFQARDLGFKLGLNPTQMKQFTKV
FMGLAKMFEDHDFALLEINPLVITDEGNIHCLDGKIGIDGNALYRQPKIRDMHDPSQDDA
REAHAAKFELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGNPANFLDVGGGATKERVAE
AFKIILSDDNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVTVPVVVRLEGTNAELGREV
LAGSDLDIIAATSLTDAAQQVVKAAEGK
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgaatttgcatgagtatcaggcaaaagctctatttgccgaatatggtttgccagtgtca
gaaggttttgcttgtgatacaccacaagaagccgttgaagctgctggaagaattggcggt
gacacttgggttgttaagtgtcaagtacatgcaggtggccgtggtaaagcgggtggcgtt
aaagttactagctctaaagacgagatccgcgcgtttgccgaacattggttaggtaaaaat
ctggtaacgtaccagacagatgagaagggtcagccggttgctaagattttagtagaaacc
tgcaccgacatcgccaacgaattgtacctaggtgccgttgtcgatcgcgcttcacgtcgt
gtggtattcatggcttctaccgaaggcggtgttgatattgagactgtggctgaaaatacg
ccagagttgatccacaaggctatcatagatccattgacaggtcctcagccattccaggct
cgtgatcttggcttcaagttgggcctaaacccgactcagatgaagcagttcactaaagtc
ttcatgggcttagctaagatgtttgaagaccatgatttcgcactactagagatcaacccg
ctggttattaccgacgaaggcaacattcactgtcttgatggcaagattggcatcgatggt
aatgcactataccgtcagcctaaaattcgtgacatgcacgatccatcacaagatgatgct
cgtgaagcacatgcagctaagttcgagcttaactatgtcgcactagacggaaacgtcggt
tgtatggttaacggtgcgggccttgctatgggaactatggacatagttaacctacacggc
ggcaatccagctaacttccttgatgttggcggcggagcgactaaagagcgcgttgctgaa
gcgttcaagatcattctgtctgacgataacgttaaagcagtattggttaacatcttcggt
ggtatcgtgcgttgtgacatgatcgctgaaggtattatcggtgcagttaaagaggtcggt
gtaaccgtacctgttgttgtccgtcttgaaggtactaacgcagaacttggccgtgaagta
ttggctggttcagatctcgatatcatcgctgccacgagtcttactgacgcggctcagcaa
gttgttaaagctgcggagggcaaataa
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