KEGG   Shewanella sp. YLB-09: FS418_14130
Entry
FS418_14130       CDS       T11533                                 
Symbol
nrdA
Name
(GenBank) ribonucleoside-diphosphate reductase subunit alpha
  KO
K00525  ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Organism
shey  Shewanella sp. YLB-09
Pathway
shey00230  Purine metabolism
shey00240  Pyrimidine metabolism
shey01100  Metabolic pathways
shey01232  Nucleotide metabolism
Module
shey_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
shey_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Brite
KEGG Orthology (KO) [BR:shey00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    FS418_14130 (nrdA)
   00240 Pyrimidine metabolism
    FS418_14130 (nrdA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:shey03400]
    FS418_14130 (nrdA)
Enzymes [BR:shey01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     FS418_14130 (nrdA)
DNA repair and recombination proteins [BR:shey03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    FS418_14130 (nrdA)
SSDB
Motif
Pfam: Ribonuc_red_lgC Ribonuc_red_lgN ATP-cone Mt_ATP-synt_D DUF6959
Other DBs
NCBI-ProteinID: QFU22891
LinkDB
Position
3332361..3334649
AA seq 762 aa
MNSNMKVTKRSGERETIDLDKIHRVITWAAKDLKNVSVSEVELRSHLQFFDGIPTEAIHE
TIIKAAADLISPEAPDYQFLSARLAVFHLRKKAFGQFEPPTLYDHVVKLVEAGKYDQHIL
EDYSREELDILDGYVDHWRDMSFSYAAVKQLEGKYLVQNRVTHEIYESAQFLYILVAACL
FAKYPSETRLSYIKRFYDAVSTFKISLPTPIMAGVRTPTRQFSSCVLIECGDSLDSINAT
ASSIVKYVSQRAGIGVNAGRIRALGSPIRGGEAFHTGCLPFFKYFQTAVKSCSQGGVRGG
AATLFYPLWHLEVESLLVLKNNRGVEDNRIRHLDYGVQLNKLMYQRLIKGGMISLFSPSD
VPGLYDAFFEDQDEFERLYLQYEADTSVRKTQIKATELFSLMMQERASTGRIYIQNVDHC
NTHSPFDSKVAPIRQSNLCLEIALPTKPLNNIDDPEGEIALCTLSALNLGAIKNLEELEP
LADLAVRALDNLLDYQDYPIIAARKSSMNRRTLGIGVINFANYLAKEGVRYSDGSANNIT
HKTFEAIQYYLLKASMNLAKEQGACPSFHETTYSKGVLPIDTYKRALDKICDEPLHMDWE
TLRQDIVKHGLRNSTLSALMPSETSSQISNATNGIEPPRGLISVKSSKDGQLKQVVPDFE
KYQYSYELLWQMPNNDGYIQLVGLMQKFVDQAISANTNYDPSRFEGNKVPMQVLLKDLLN
AYKLGVKTLYYHNTRDGASDQMDSMISIEKEDDDCEGGACKI
NT seq 2289 nt   +upstreamnt  +downstreamnt
atgaatagcaatatgaaagtcactaaacgtagtggcgagcgcgagaccatcgacctagac
aaaatccaccgcgtgatcacatgggcagccaaagatcttaagaatgtttcagtctctgaa
gtagagctcagatcgcacctgcaatttttcgatggtattccaaccgaagctattcatgaa
acgattattaaggccgcagccgatctcatctcaccagaagcacctgattaccagttcctc
tctgcccgattagccgtctttcatttaagaaagaaggcatttggtcagtttgagccgcct
acactttatgatcatgttgtcaaactggtcgaggctggtaaatatgaccaacatattctt
gaggattacagccgcgaagaactcgatatcttagatggttatgtggatcactggcgcgat
atgagtttttcttatgcggcagtcaaacaactggaaggtaagtacctagtgcaaaaccgg
gtcactcacgagatatatgagagtgcgcaattcctttatatcttagtcgccgcctgtttg
ttcgctaaatatccaagtgagacacgcctaagctacattaagcgtttctatgatgcggtt
tccacctttaaaatctcactgccaacaccgatcatggcaggggtacgtactcctacacgt
cagttcagctcatgtgtgttgattgaatgtggcgatagcttagattcaatcaatgcgacg
gcctcttcgattgttaaatacgtcagccagcgcgccgggattggtgtgaatgccggtcgc
atccgtgcattaggtagcccaatacgcggcggtgaagcattccatacaggctgtttacct
ttctttaagtatttccagacagcggttaagtcatgctcgcaaggtggcgtacgtggtgga
gctgcgacactgttttacccgctttggcatttagaagttgagtcattactggtattgaag
aataaccgtggtgttgaagataaccgtattcgtcatcttgattacggtgttcagctcaac
aaacttatgtatcagcgcctaattaagggcggcatgatcagcctcttcagtccatcagat
gtcccaggactgtatgatgccttttttgaagaccaagacgagttcgaacgtctctatctt
cagtatgaagccgatacatctgtgcgcaaaacacagattaaggcgacagagcttttctca
ttgatgatgcaagaacgtgcctctactggccgtatctatattcaaaatgtggatcattgt
aatacacacagtccttttgacagcaaggttgcaccgatcagacaatcaaacctgtgtctt
gagattgcactgccgactaagccgctcaataacatagatgatcccgaaggtgaaatagcc
ctttgtaccttgtctgcactcaatttaggggcgattaaaaacctagaagagcttgagccg
ttagccgatctcgcagtaagggcattagataacttactcgattaccaggattaccctatc
atcgcggcacgcaagtcttcgatgaatcgtcgaactttaggcataggcgtgattaacttt
gctaattacttggcgaaggaaggggtacgctactcagatggttcggctaataacattacc
cacaagacattcgaagccatacagtactacctactcaaagcatcgatgaatttggctaaa
gagcaaggcgcttgtccatcattccacgaaacgacgtattcgaagggtgtactgcccatc
gatacctacaagcgtgccctggataagatatgtgatgagccgctacatatggattgggaa
acactgcgccaagatatcgttaagcatggcttgcgtaactctaccttatccgcattaatg
ccatctgaaacatcatcgcagatctctaatgcgactaacggtattgaacctcctcgtggg
ctcattagtgtaaaatcgagtaaagatggccagcttaagcaagtggtaccggatttcgag
aagtaccaatatagctatgaactactttggcagatgcccaataatgatggttatatacag
cttgtgggcttgatgcagaagtttgttgaccaagctatctcggcaaatactaactatgat
ccaagccgattcgaaggtaacaaggtcccgatgcaggtattattgaaagacttgctgaat
gcttacaaactcggtgtcaagacgctctattatcacaacactcgtgatggcgcttcagat
cagatggatagcatgatcagcattgagaaagaagatgacgactgcgaaggcggtgcgtgt
aagatataa

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