Shewanella sp. YLB-09: FS418_17900
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Entry
FS418_17900 CDS
T11533
Symbol
cydB
Name
(GenBank) cytochrome d ubiquinol oxidase subunit II
KO
K00426
cytochrome bd ubiquinol oxidase subunit II [EC:
7.1.1.7
]
Organism
shey Shewanella sp. YLB-09
Pathway
shey00190
Oxidative phosphorylation
shey01100
Metabolic pathways
shey02020
Two-component system
Module
shey_M00153
Cytochrome bd ubiquinol oxidase
Brite
KEGG Orthology (KO) [BR:
shey00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
FS418_17900 (cydB)
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FS418_17900 (cydB)
Enzymes [BR:
shey01000
]
7. Translocases
7.1 Catalysing the translocation of protons
7.1.1 Linked to oxidoreductase reactions
7.1.1.7 quinol oxidase (electrogenic, proton-motive force generating)
FS418_17900 (cydB)
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Motif
Pfam:
Cyt_bd_oxida_II
Motif
Other DBs
NCBI-ProteinID:
QFU23545
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All DBs
Position
complement(4197361..4198500)
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AA seq
379 aa
AA seq
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MFDYELLRFIWWALIGVLFIGFAVTDGFDMGVGALLPILGKDDTERRIMINSIAPHWDGN
QVWLITAGGALFAAWPMVYGVSFSGFYVAMMLVLFALFLRPVGFDYRSKIEDPRWRAAWD
WALFVGGFVPPLIIGVAFGNLLQGVPFNFDEYLRATYHGGFFGLLNPFGLLAGLVCVSMF
MMQGATWLQMKTEGELRVRAAKAGQLFAALLFVLFGAAGVWLVNGIDGFVITSTIDTYGI
SDPTLKTVAIESGAWLANYDKYPFTMMFPIIGLVMPLLVLLTSRLNRSGFAFLFSSLAIA
AVILTCGAAMFPFVMPSSLEPNVSLTMWDATASKMSLTVMTWAAIIFVPIVLSYTIYTYM
KMFGRLSREFIENNKTSLY
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgtttgattatgaattattaagatttatctggtgggcactcataggtgtgctgttcatt
ggatttgcagttacggatggttttgatatgggggtcggcgcacttttacctattttaggc
aaagatgacaccgagcgtcgtattatgattaactccatcgccccacattgggatggtaac
caggtatggctgatcactgccggtggcgcgctctttgccgcttggcctatggtatacggt
gtctcattctctggcttctatgtcgcgatgatgttggtattgttcgccttgttcctacgt
ccggtaggtttcgattaccgttcgaagattgaagatccaagatggcgagctgcgtgggat
tgggcactgtttgttggcggttttgttccaccgctaattatcggtgttgcatttggtaac
ttattacaaggtgttccatttaactttgatgagtatttacgtgcaacttatcacggtggc
ttcttcggcctgttgaatccatttggtctgcttgctggccttgtgtgtgtcagcatgttt
atgatgcaaggtgctacttggttacagatgaagacagaaggcgagcttagagttcgtgct
gctaaagccggtcagttattcgcggctctgctattcgttctatttggtgccgctggcgtt
tggttagtcaatggtattgatggttttgtcattacttcgactatcgacacttatggcata
tcagatccaacccttaaaacggttgcaatagagtctggtgcttggttggcgaactatgat
aagtatccattcactatgatgttccctattatagggctagtgatgccactgcttgtttta
ctgacgagtcgcttaaaccgctcaggcttcgccttcttgtttagctcattggcgattgct
gccgtgatcttaacttgtggcgccgctatgttcccattcgtcatgccgtcttctttggag
ccaaacgtgagtttgaccatgtgggatgccactgcgagtaaaatgtctctgactgtaatg
acatgggctgcgattatctttgttccgattgttctctcatataccatatatacctatatg
aagatgttcggtcgtttatcgcgcgaatttattgaaaataataagacgtcactttactaa
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