Shewanella sp. YLB-09: FS418_18605
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Entry
FS418_18605 CDS
T11533
Symbol
lpxB
Name
(GenBank) lipid-A-disaccharide synthase
KO
K00748
lipid-A-disaccharide synthase [EC:
2.4.1.182
]
Organism
shey Shewanella sp. YLB-09
Pathway
shey00540
Lipopolysaccharide biosynthesis
shey01100
Metabolic pathways
Module
shey_M00060
KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type
Brite
KEGG Orthology (KO) [BR:
shey00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
FS418_18605 (lpxB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
shey01005
]
FS418_18605 (lpxB)
Enzymes [BR:
shey01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.182 lipid-A-disaccharide synthase
FS418_18605 (lpxB)
Lipopolysaccharide biosynthesis proteins [BR:
shey01005
]
Lipid A
FS418_18605 (lpxB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LpxB
Motif
Other DBs
NCBI-ProteinID:
QFU23668
LinkDB
All DBs
Position
complement(4364982..4366121)
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AA seq
379 aa
AA seq
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MSDTKQKIFAMVAGEISGDILGAGLIQALQAHYPDARFIGIGGPRMESLGFESLFSYEEL
AVMGIVEVLSRLPRLLKVRKILINEICAIQPDCFIGIDAPDFNIGLELKLKKRGIKTVHY
VSPSVWAWRPKRIFKIAKATDMVLSLLPFEKAFYDKHQVPCTFVGHTLADDIPLESDKLA
ARRVLGLEPEAEYLAILPGSRAGELKLLAEPFVKAACLIKQKYPDIKFVTPLVNAKRREQ
FEMTLKEHAPALDITLIEGQSREVMAASDYILLASGTATLEAMLVKRPMVVAYRVSPITY
KIAKCMMKIAYYSLPNLLSNQELVPEFIQDDCTEDKIAAAIACQMDKDFTPVKEQFTCLH
KQLKCNASVRAADAVLKLI
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatacaaaacaaaagatatttgcaatggttgccggggagatctctggcgatatt
ttaggtgcaggtctcattcaggcattacaagcccattatccagatgcccgctttattggt
atcggtggcccccgcatggagtccttaggttttgaatcgctcttctcatacgaagagctg
gctgtaatggggatcgttgaagtgctttcaaggctgccacgcctattaaaagtgcgtaaa
attctaatcaatgaaatatgcgcgattcaacctgactgcttcatcggtatcgatgctccg
gattttaatattggcttagagttaaaactcaaaaaacgcggcatcaaaactgtccattac
gtcagtccatcagtttgggcgtggcgaccaaaacgtattttcaaaatcgcaaaagccact
gatatggttttatctttattgccttttgaaaaagcgttttatgataagcatcaagtgcct
tgtacttttgtcggccatacgttggctgatgatattcctctagagagcgacaagttagca
gctaggcgtgtcttaggcttagagcctgaggctgagtacctagcaatccttcctggctcg
agagctggggagttaaagctgctagcggagccttttgtaaaagcagcatgtttaattaaa
caaaagtacccagatattaaatttgttaccccgctagttaatgctaagcgccgtgaacag
tttgaaatgacgcttaaagagcatgcgccagcgctggatatcacgttaattgaaggtcaa
tctcgggaagtgatggctgcatcggattacatcttactcgcttcaggtacggcaacatta
gaagccatgttagttaagcggcctatggtggttgcatatcgagtcagccctattacttat
aaaatagccaagtgcatgatgaagatagcgtattactcgctaccaaatttgctatcaaat
caggaattagtccccgagtttatacaagatgattgtaccgaagataaaattgctgctgca
attgcgtgtcagatggataaagatttcactccggttaaagagcagtttacatgcctacat
aagcagctgaaatgtaatgccagtgtgcgtgcagctgatgccgtgcttaagttaatttag
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