Shewanella sp. YLB-09: FS418_19745
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Entry
FS418_19745 CDS
T11533
Symbol
ribB
Name
(GenBank) 3,4-dihydroxy-2-butanone-4-phosphate synthase
KO
K14652
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:
4.1.99.12
3.5.4.25
]
Organism
shey Shewanella sp. YLB-09
Pathway
shey00740
Riboflavin metabolism
shey00790
Folate biosynthesis
shey01100
Metabolic pathways
shey01110
Biosynthesis of secondary metabolites
shey01240
Biosynthesis of cofactors
Module
shey_M00125
Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:
shey00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00740 Riboflavin metabolism
FS418_19745 (ribB)
00790 Folate biosynthesis
FS418_19745 (ribB)
Enzymes [BR:
shey01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.25 GTP cyclohydrolase II
FS418_19745 (ribB)
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.12 3,4-dihydroxy-2-butanone-4-phosphate synthase
FS418_19745 (ribB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DHBP_synthase
GTP_cyclohydro2
Motif
Other DBs
NCBI-ProteinID:
QFU23857
LinkDB
All DBs
Position
complement(4608629..4609732)
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AA seq
367 aa
AA seq
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MSLHSIEEIIEDIRLGKMVILMDDEDRENEGDLIMAADMVTPEAVNFMATFGRGLICQTL
TKQRCEQLSLPLMVTNNNAQFSTNFTVSIEAAEGVTTGISAQDRAVTVKAAVAKGAKPSD
IVQPGHIFPLMAQEGGVLIRAGHTEAGCDLARLAGFEASSVIVEILNDDGTMARRPDLEI
FAEKHGLKMGTIADLIEYRNTKETNVVREAQCKLPTRFGTFDMLTFRDTIDNQLHFVLIN
GEVKEDVLVRVHLQNTFNDLLHSERDQKRSWPLEKAMQRIADEGGVLVLLGNQEHSSDIL
AKVKAFELEDSGQAPTTAKWQGTSRQVGVGSQILADVGVTKMRLLSSPKRYHSLSGFGLE
VTDYIAE
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttacacagtatagaagagatcatcgaagatattcgtctcggtaaaatggttatc
ttgatggacgatgaagatcgtgaaaatgaaggtgatttgatcatggcagcagacatggtc
acgccagaagccgttaactttatggcgacttttggtcgcggcctgatctgtcagacattg
acaaagcagcgctgtgagcagctgagcctacctttgatggtgactaacaataacgctcag
ttttcaactaactttacggtttctattgaggcggctgaaggtgttacaaccgggatctct
gcgcaagatagagctgtaacagttaaagctgcggtcgctaaaggtgccaagccaagtgat
atcgtacaacctggccatatatttcctctgatggctcaggaaggtggggtgttaatacgt
gcaggtcatactgaagcgggttgtgatttagccagacttgcaggttttgaagcatcatct
gtgattgttgagatcctcaatgatgatggcaccatggctcgtcgtccagatcttgaaatt
ttcgcagagaaacatggtcttaagatgggtactattgccgatcttatcgagtatcgcaat
accaaagagaccaatgttgttcgtgaagcacaatgtaaactacccacgcgttttggtacc
ttcgatatgttgacctttagggatactatcgataatcagcttcattttgtattgattaat
ggtgaagtgaaagaagatgtgctggtacgggtacatctgcaaaatacattcaatgatttg
ttacattcagaacgtgatcagaagcgcagttggccattagaaaaggcgatgcagcgaatt
gccgatgaaggcggtgtcttagtcttactcggtaaccaagagcatagcagtgatattctt
gcaaaagtgaaagcatttgagttagaagatagtggtcaagcaccaacaacggcaaagtgg
caaggtacatctcgtcaggtgggcgtaggttcacagatcttagccgatgtcggagtgact
aagatgcgtttacttagttcgccaaagcgttatcattcactttccggttttggattggaa
gtcactgattatatagccgaatag
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