Shewanella sp. YLB-09: FS418_19765
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Entry
FS418_19765 CDS
T11533
Name
(GenBank) aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
shey Shewanella sp. YLB-09
Pathway
shey00260
Glycine, serine and threonine metabolism
shey00460
Cyanoamino acid metabolism
shey00630
Glyoxylate and dicarboxylate metabolism
shey00670
One carbon pool by folate
shey00680
Methane metabolism
shey01100
Metabolic pathways
shey01110
Biosynthesis of secondary metabolites
shey01120
Microbial metabolism in diverse environments
shey01200
Carbon metabolism
shey01230
Biosynthesis of amino acids
shey01240
Biosynthesis of cofactors
shey04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
shey00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
FS418_19765
09102 Energy metabolism
00680 Methane metabolism
FS418_19765
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
FS418_19765
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
FS418_19765
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
FS418_19765
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
FS418_19765
Enzymes [BR:
shey01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
FS418_19765
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
OKR_DC_1
Chlorosome_CsmC
Motif
Other DBs
NCBI-ProteinID:
QFU23861
LinkDB
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Position
complement(4612311..4613567)
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AA seq
418 aa
AA seq
DB search
MLKKDMNIADFDPQLFQAIEDETRRQEEHIELIASENYTSPRVLEAQGSQLTNKYAEGYP
GKRYYGGCEHVDIAEELAISRAKELFGATYANVQPHSGSQANAAVFMALLQGGDTVLGMS
LAHGGHLTHGSHVSFSGKLYNAVQYGIDETTGKIDYAEVERLAVEHKPKMVIAGFSAYSG
IIDWGKFREIADKVGAYLFVDMAHVAGLVAAGIYPNPLPHAHVVTTTTHKTLAGPRGGLI
LSAIDDEAIYKKLNSAVFPGGQGGPLMHVIAAKAVAFKEALEPEFKTYQEQVVVNAKVMA
KTFIERGYDVVSGGTDNHLFLLDLISKDMTGKDADAALGLANITVNKNSVPNDPRSPFVT
SGLRIGSPAITRRGFKEEQSVELTNWMCDVLDDISNKGTIERVKKQVLELCAKFPVYG
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaaaaagatatgaatattgcggacttcgatccacaactgtttcaagcgattgaa
gatgaaactcgccgccaagaagagcatatcgaacttattgcttcagaaaactacactagt
ccacgtgtacttgaagctcaaggttctcagctaacgaataagtatgctgaaggttaccct
ggtaagcgttactacggtggctgtgagcatgtagatatcgcagaagaacttgcgatttct
cgtgctaaagaattatttggtgcgacatatgcgaacgtgcagccacactctggttcacaa
gcaaacgctgcggtgttcatggcgctacttcaaggcggcgatactgtacttggtatgagc
ttggcacatggtggacacctgactcacggttcacatgtcagcttctcaggtaagctatat
aacgctgttcaatacggtatcgacgagacaacaggtaagattgattacgctgaagttgaa
cgtcttgctgttgagcataagccaaagatggtcattgcaggtttcagtgcatattctggc
atcatcgattggggcaagttccgtgaaatcgctgataaagttggcgcatatctgtttgtt
gatatggcacacgttgccggtcttgtggcagcgggtatctacccgaacccacttccacat
gcgcacgttgttacgacaaccactcataagacattagcgggccctcgtggtggtcttatt
ttgtctgctatcgatgacgaagctatctacaaaaagctgaattctgcagtatttcctggc
ggtcaaggtggtcctttaatgcacgttatcgctgctaaagcggttgcatttaaagaagct
ctagagccggaattcaaaacataccaagagcaagttgttgttaatgctaaggttatggct
aaaacattcatcgagcgcggctacgatgttgtttctggtggtaccgataaccatctattt
ttgcttgatctaattagcaaagatatgacgggtaaagatgctgatgcagcccttggtctt
gctaacatcacagtgaacaaaaactcagtacctaacgacccacgctcaccatttgtgact
tcaggcctacgtatcggctctcctgctatcacacgtcgtggtttcaaagaggaacagtct
gtagaactgacaaactggatgtgtgatgtactggacgatatcagtaacaaaggcactatc
gagcgcgttaagaaacaagtgcttgagctatgtgctaagtttccagtttacggataa
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