Shewanella sp. YLB-09: FS418_20730
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Entry
FS418_20730 CDS
T11533
Symbol
rodA
Name
(GenBank) rod shape-determining protein RodA
KO
K05837
peptidoglycan glycosyltransferase [EC:
2.4.99.28
]
Organism
shey Shewanella sp. YLB-09
Pathway
shey00550
Peptidoglycan biosynthesis
Brite
KEGG Orthology (KO) [BR:
shey00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
FS418_20730 (rodA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
shey01003
]
FS418_20730 (rodA)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
shey01011
]
FS418_20730 (rodA)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
shey03036
]
FS418_20730 (rodA)
Enzymes [BR:
shey01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
FS418_20730 (rodA)
Glycosyltransferases [BR:
shey01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
FS418_20730 (rodA)
Peptidoglycan biosynthesis and degradation proteins [BR:
shey01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase
FS418_20730 (rodA)
Chromosome and associated proteins [BR:
shey03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
FS418_20730 (rodA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FTSW_RODA_SPOVE
Motif
Other DBs
NCBI-ProteinID:
QFU24032
LinkDB
All DBs
Position
4837599..4838705
Genome browser
AA seq
368 aa
AA seq
DB search
MNSQNHRPNIWQRLHIDLPLLIGILSLMGFGLFVIYSAGGEDLALMERQLVRMGLSLGIM
FIVAQINPEVLRRWAFPIYLAGIALLLGVHFFGEINKGAQRWLNLGFMEFQPSELIKLAF
PITMAWYISKYPLPPKKRNLAMAGVILLIPTLLIAKQPDLGTSILVAASGIFVLFLSGMS
WAIVGTFVGGILAMLPALWFFLMHDYQRTRVLTLLDPEKDPLGAGYHIIQSKIAIGSGGA
FGKGWLEGTQSQLEFLPERHTDFIFAVIGEEFGLVGSILLLLIYLYVIGRGLIIASRAQT
SFARLLAGSITLTFFVYIFVNIGMVSGLLPVVGVPLPLISYGGTSMMTLMTGFGILMSIH
THRRFIDR
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgaattcgcaaaatcatcgtcccaacatttggcagcgacttcatatagacttacctctg
ttaatcggcattttaagccttatgggatttggcttatttgttatttactcggcaggcggt
gaggatttagccctgatggaaagacaactcgttcgtatgggtttgtctttaggtatcatg
ttcatagtggcacaaatcaacccagaagtgttaagacgttgggcttttcccatatatctt
gccggtatagcattactattaggtgtgcacttttttggtgagataaataaaggggctcaa
cgttggctaaatcttggctttatggagtttcaaccctcagagctcatcaagttagccttc
cctatcaccatggcttggtacatcagtaagtaccctcttccccccaagaaaagaaattta
gccatggcgggagtcatcttactgatcccaaccttattgatcgcaaaacaaccggatcta
ggtacttccattctcgttgctgcctcgggaatttttgtcctattcctatcgggtatgagc
tgggcgattgtaggaacatttgtcggcggcatactcgctatgctacctgcactctggttc
ttcttaatgcatgattaccagagaactcgtgttctcaccttgctcgatcctgaaaaagac
ccgctcggcgcaggctatcatatcatccaatctaaaatcgcaatcggttctggtggcgcc
tttggtaaaggctggctcgaaggtacccagtcgcaacttgagtttctcccagaaagacac
acagatttcatctttgcagtcataggcgaagagtttggattggtagggagtatcctgttg
ttgcttatctatctatatgtgatcggcagaggcctcatcatcgcctctagagcgcagact
agttttgcccgcttgttagctggcagtattacgctgactttcttcgtctatatttttgtc
aatatcggcatggtatcaggcctgttacccgttgttggtgtccccctccctttaattagt
tatggcggcacctcaatgatgaccctgatgacggggttcggtatattaatgagcattcat
acccataggcgatttatcgacaggtag
DBGET
integrated database retrieval system
