Shewanella sp. YLB-09: FS418_22870
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Entry
FS418_22870 CDS
T11533
Symbol
crp
Name
(GenBank) cAMP-activated global transcriptional regulator CRP
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
shey Shewanella sp. YLB-09
Pathway
shey02020
Two-component system
shey02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
shey00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FS418_22870 (crp)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FS418_22870 (crp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shey03000
]
FS418_22870 (crp)
Transcription factors [BR:
shey03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
FS418_22870 (crp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
HTH_Crp_2
Crp
HVO_A0261_N
HTH_23
RepL
HTH_24
Sigma70_r4
MarR
HTH_ParB
HTH_28
HTH_11
bAvd
MarR_2
GntR
HTH_7
Motif
Other DBs
NCBI-ProteinID:
QFU24406
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Position
5354225..5354860
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AA seq
211 aa
AA seq
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MALIGKPKPDPTLEWFLSHCHIHKYPAKSTLIHAGEESDTLYYIVKGSVAVLIKDEEGKE
MILSYLNQGDFIGELGLFEEQSERTAWVRAKQPCEIAEISYKKFKQLIQVNPEILMKLSS
QMAYRLHSTSQKVGDLAFLDVAGRIAQTLLHLAKQPDAMTHPDGMQIKITRQEIGQIVGC
SRETVGRILKMLEEQSLIQAHGKTIVVYGTR
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atggctcttattggtaagccaaaaccagatcctactttggaatggtttttatcacactgt
cacattcataagtatccagccaagagcactttgatccacgctggtgaagaatcagacact
ctttactacatagttaaaggctccgtagccgttttaattaaagatgaagaaggtaaagag
atgattctctcttacctcaaccaaggtgacttcatcggtgaacttggcttgtttgaagag
caatctgagcgaactgcgtgggtaagagccaagcagccatgtgaaattgcagaaatttca
tataagaagtttaagcagcttattcaggttaaccctgaaattttaatgaagctttcttct
caaatggcttaccgtctacacagcactagccaaaaagtgggtgatctcgctttcttggac
gttgctggaagaattgcccaaacgttactgcatcttgctaagcaaccagatgctatgact
cacccggatggcatgcagatcaagatcactcgtcaagagattggtcagattgttggctgt
tctcgtgaaaccgttggtagaatattaaaaatgcttgaagagcaaagccttatacaagct
cacggtaaaactatcgtcgtatacggaactcgctaa
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