Shewanella sp. YLB-09: FS418_23225
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Entry
FS418_23225 CDS
T11533
Name
(GenBank) ribonuclease R
Organism
shey Shewanella sp. YLB-09
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GFIT
Motif
Pfam:
RNB
CSD2
OB_RNB
S1
WHD_RNase_R
Motif
Other DBs
NCBI-ProteinID:
QFU24470
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Position
complement(5425457..5427958)
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AA seq
833 aa
AA seq
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MIKDPHLKREQDTYENPIPSREFILEYLRSEKSPLNRERIATALKLESEEHLEALRRRLR
AMERDGQLVFTRGQAYGLPERMDLLTGTIIGHRDGFGFLKLEEGGDDLFINNRDMLMYFH
GDKVLAQKAGVDRKGRREARIVRLVEQRAAALVGRFHLDSGMAFVIADDRRIGQEILIAD
EDRNGARQGDVVVLELTRRPGRYVKAAGKVTEVLGKQLAPGMEIEIALRNYDLPHTWSSL
IEKKLRAIPDEVTEADKVDRVDLRHLPLVTIDGEDARDFDDAVYAESKKSGGWRLWVAIA
DVSHYVRTESALDKEARSRGNSVYFPSQVIPMLPEKISNGLCSLMPEVDRLCMVAEMTIS
AAGKLSGYKFYSAVMHSHARLTYTQVADMLEGGEVSDKLKPIFPHLQTLQSLYLTLDETR
AERGAIAFETTETQFVFNDDRKIDSIIPRNRNQAHKIIEECMILANVASAKFVKKHKGEV
LYRVHEAPSEQKLTNFKDFLKERGLTIEGGLEPTPKDYQAVMEQIADRPDAELIQIMLLR
SMRQATYTPDNEGHFGLALEAYSHFTSPIRRYPDLILHRVIRYLLAKEKGEGKEKWTTDG
GYNYQLEELDLLGVECSTTERRADEATRDVSDWLKCEFMQDHVGDTFEAVIASVTHFGMF
VRLDKLFIDGLVHISSLGSDYFQYDNMRQRLVGETSGQIYQLGDAITVKVAGVNLDDRQI
DLMMEGDDAKSKRPSRGKKPMTARERVNAEGAKRGKADKSDKPKRRGSRSKAAAGKDSGD
KSFGSGKASTSDGAKKSGTKTKTAAKKSKAKKSSAKKASVKKNPAKRKAKASK
NT seq
2502 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaagatccgcatttaaagcgtgaacaagacacatacgaaaaccccattccaagc
cgcgagtttattttagagtacttgcgatccgaaaaatctcctcttaaccgtgaacgaatc
gcaacggcgttaaaactcgaaagtgaagaacacctcgaagcgctacgcagacgtttacgt
gccatggagagagatgggcagctggtatttacccgtggtcaagcctatggcttacctgaa
cgcatggacctactgactgggactatcataggtcacagagatggtttcggcttcttgaag
ctggaagagggaggcgatgacctctttatcaataaccgtgacatgttgatgtatttccac
ggtgataaggtgctggctcaaaaagccggcgttgaccgtaaaggccgacgtgaagcgcgt
atcgttcgtttagttgaacagagagccgctgctttagtggggcgtttccatttagattct
ggcatggctttcgtcattgccgatgacaggcgcataggtcaagagatactcattgccgat
gaggaccgtaatggtgctcgccagggtgatgtcgtggtactcgaattgacccgtcgtccg
ggccgctatgtgaaggccgcaggtaaagtcaccgaagttctaggtaaacaactcgctcca
ggcatggagatcgaaattgccctgcgtaattacgatctgccacatacctggtcgagttta
attgagaagaagctgcgcgctattcctgatgaagtgaccgaagcagacaaagtggaccgt
gtcgacttacgtcatctgcctcttgtcaccatagatggcgaagatgcccgagatttcgat
gatgccgtttatgctgaatcgaagaagagcggtggctggcgtctttgggtagcgattgcc
gatgtgagccattatgtgcgcaccgaatctgctttagataaggaagcacgtagtcgagga
aattcagtttatttcccatcgcaagtgatccctatgctgccagagaagatctctaatgga
ttatgttctttgatgccagaggttgaccgcttatgtatggtggcagaaatgaccatttct
gctgcgggcaagctgtcaggatataaattctattcggctgttatgcattctcatgcgcgt
ctgacttatacccaggttgccgatatgcttgaaggcggtgaggtgagcgataagcttaag
ccaatattcccgcatctgcagacgttgcaatctctgtatcttactctagatgaaactcgc
gccgagcgtggtgccattgcatttgaaaccactgaaactcagtttgttttcaatgatgat
cggaagatcgacagcataataccgcgcaatcgtaatcaggctcataagatcatcgaagag
tgtatgattttggccaacgtggcctcggctaagtttgttaagaagcataaaggcgaagta
ctgtaccgtgtccatgaggcaccatcagagcagaagctgactaactttaaggacttcctt
aaagagcgcggcttaacgatagagggtgggcttgagccgacgcctaaagattaccaagct
gtgatggagcagattgccgatagacccgacgcagagttgattcagattatgttgctgcgc
tctatgcgtcaggcaacttatacgccggataatgaaggtcactttggtttagcactcgag
gcatactctcactttacctcgcctattcgtcgttacccagatctgatcctgcaccgggtt
attcgctacttgttagcgaaagagaagggagaggggaaagagaaatggacaacggatggt
ggttataactatcagctagaagagttagatcttcttggtgtcgagtgttctaccactgag
cgccgtgccgatgaggcgacccgtgatgtgagtgattggctcaaatgtgaatttatgcaa
gaccatgtgggtgacacgtttgaggctgttatagcgtcagtgacacactttggtatgttt
gttcgcttggacaagctatttatcgatggcttagtgcatatctcaagcttaggcagtgac
tatttccagtatgataatatgcgtcagcgtttggttggagagacatccggtcaaatttat
cagcttggtgatgcgataacggttaaggttgccggtgtaaacttagatgatcgccaaatc
gatcttatgatggaaggtgatgacgctaagtctaagcgtcctagccgaggcaagaagccg
atgaccgccagagagcgagtcaatgcagaaggcgctaagcgaggcaaagctgataagagc
gataagcctaaacgacgtggttctcgttcgaaagctgcggcgggcaaagactctggtgat
aagagctttgggtccggtaaagcaagtaccagtgatggggctaagaagtccggcactaaa
acaaaaacggcggctaagaagtcgaaggctaaaaagtcttcagcaaaaaaggcttcggta
aagaaaaacccagctaagcgtaaagctaaagcaagcaagtaa
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