KEGG   Shewanella sp. FDAARGOS_354: CEQ32_00880
Entry
CEQ32_00880       CDS       T04944                                 
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
  KO
K01710  dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
Organism
shf  Shewanella sp. FDAARGOS_354
Pathway
shf00521  Streptomycin biosynthesis
shf00523  Polyketide sugar unit biosynthesis
shf00525  Acarbose and validamycin biosynthesis
shf00541  Biosynthesis of various nucleotide sugars
shf01100  Metabolic pathways
shf01110  Biosynthesis of secondary metabolites
shf01250  Biosynthesis of nucleotide sugars
Module
shf_M00793  dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:shf00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 Biosynthesis of various nucleotide sugars
    CEQ32_00880 (rfbB)
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    CEQ32_00880 (rfbB)
   01055 Biosynthesis of vancomycin group antibiotics
    CEQ32_00880 (rfbB)
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    CEQ32_00880 (rfbB)
   00525 Acarbose and validamycin biosynthesis
    CEQ32_00880 (rfbB)
Enzymes [BR:shf01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.46  dTDP-glucose 4,6-dehydratase
     CEQ32_00880 (rfbB)
SSDB
Motif
Pfam: GDP_Man_Dehyd Epimerase RmlD_sub_bind Polysacc_synt_2 3Beta_HSD NAD_binding_4 adh_short NAD_binding_10 KR Sacchrp_dh_NADP DapB_N TrkA_N NmrA
Other DBs
NCBI-ProteinID: ASF13742
LinkDB
Position
172338..173369
AA seq 343 aa
MRILITGGAGFIGSALVRMLIEQTMCIVINVDKLTYASHPEALAAIADSERYHFIQADIC
DGATLEQVFQAHQPDVVMHLAAESHVDRSIEGPAAFIQTNIVGTYTLLEASRRYWQQLAD
TRKGLFRFHHVSTDEVFGSLTETGLFSETSAYDPSSPYSASKASADHLVRAWHRTYALPI
VMTNCSNNYGPFQYPEKLIPLMVTNALQGKPLPIYGNGQQVRDWLYVDDHVKALYLVATQ
GELGQTYNIGGSCEQTNLTVVRQICALLEELVPTHPQSLAMGSAGFADLIQYVVDRPGHD
VRYAIDASKIQRELGWRAQESFESGLRKTVEWIINQQYPITSD
NT seq 1032 nt   +upstreamnt  +downstreamnt
atgcgaatactcattaccggtggtgcagggtttattggatcggcattagtgcgaatgctg
attgagcaaacgatgtgcatcgtgatcaatgtcgataagttaacctatgccagtcatcca
gaggctttagcggctattgccgatagtgagcgctatcatttcatacaggcggatatttgt
gatggagcgacattagagcaagtctttcaggctcatcagcccgatgtggtaatgcattta
gcggctgaaagtcatgttgatcgctcaattgaaggacccgctgcatttatccaaaccaac
attgtgggcacctatacgttgttagaagcttcgcgccgatattggcagcaattagcggat
acgcgaaaagggttatttagatttcatcatgtttctaccgatgaggtttttggttcactg
accgaaactggattgtttagtgaaacctcagcttatgatccgagctcgccttattcagca
agtaaagcttcagcggatcatttggttcgtgcttggcatcgaacttatgctttaccgata
gtgatgaccaactgctccaataactatggcccttttcaataccctgaaaagctcattccc
ctaatggtcaccaatgcgttacagggtaaaccgttgccaatttatggtaatggtcagcaa
gtgcgtgattggttgtatgtggatgatcacgttaaggcgctctatttagttgcgactcag
ggggagcttgggcaaacctataatattggtggttcctgtgagcaaactaatttgacggtt
gtgcggcaaatttgcgccttattagaggagttagtgcctactcatccgcaatctcttgca
atgggtagtgcgggttttgctgatttaattcagtatgttgttgaccggcctggccatgat
gtacgctatgctattgatgccagtaaaattcaacgtgaattaggttggagagcgcaagag
tcttttgagtcaggtctcagaaagacggtggagtggattattaaccagcaatatcctata
acgagcgactag

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