Shewanella sp. FDAARGOS_354: CEQ32_01170
Help
Entry
CEQ32_01170 CDS
T04944
Name
(GenBank) ABC transporter ATP-binding protein
KO
K18893
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
shf
Shewanella sp. FDAARGOS_354
Pathway
shf02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
shf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CEQ32_01170
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shf02000
]
CEQ32_01170
Transporters [BR:
shf02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
CEQ32_01170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
RsgA_GTPase
MMR_HSR1
AAA
AAA_29
AAA_22
ATP-synt_ab
AAA_16
Septin
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
ASF13780
LinkDB
All DBs
Position
complement(225649..227478)
Genome browser
AA seq
609 aa
AA seq
DB search
MFKRFESWVEALPDGEPTKPPTGVYAFCRHYTKGYELPLILMSVLTAFIAMLEVSLFGFM
GQLVDWLVKKSPETLYQDEGSTLILMGVMVLVVMPLLVLFHALIMHQTLLGNYPMSIRWL
AHRYLLKQSVSFYQNDFAGRIATKVMQTSLAVRETVMKLLDVLVYILVYFTSMLVMVASA
DVRLVVPMLIWLALYIGLQWYFVPRLKTVSTEQADARSTMTGRIVDSYTNITTVKLFAHT
DKEADYAKASMRSFLDTVYRQMRLVTGISVSVQIINYLLAFSIAAVSITLWSDNAISVGA
IAIAVSLALRLNGMSQWIMWEISSLFENIGTVTDGMNTLSKTTLIQDSPDANTLVVEQGR
IDFNQVSFHYGENTGVIDELNLTIKAGEKVGLVGRSGAGKSTLVNLLMRFYDVEKGQICI
DGQDIKSVKQDSLRSQIGMVTQDTSLLHRTIRENILYGNPGASETQLEHAIKQAQAHDFI
NELTDPNGNHGLDAQVGERGVKLSGGQRQRIAIARVLLKNAPILLLDEATSALDSEVEAA
IQESLYELMQGKTVIAIAHRLSTIAAMDRLIVLDQGRIVEQGTHQELIAAGGIYAQLWAH
QTGGFLGVE
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaacgatttgaatcttgggtggaagccctaccggatggcgaaccaaccaagcct
cccacgggggtgtatgcgttttgccgccactacactaagggttatgaattaccgctgata
ttaatgtcagtgctgacggccttcatcgccatgctcgaagtttcactctttggctttatg
ggacaattagtcgattggttagtgaaaaaaagcccagagacgctctatcaggatgaaggt
tcaacactgatattaatgggtgtaatggtcctagtggtgatgccattattagtgctattt
catgcactgatcatgcatcaaaccttgctgggcaattatcccatgtcgatccgctggctt
gcgcaccgctatctgctcaagcaaagcgtgtccttctatcagaatgactttgctggccgt
attgccactaaggtgatgcaaacctcccttgcggtgcgtgaaaccgtgatgaaactcctc
gatgtactggtatacattttagtgtacttcacctccatgctggtgatggtggccagtgcc
gatgtgcgcctagtggtcccgatgctgatttggctagcgctctatattggtctgcaatgg
tactttgtgccgcggcttaaaacagtctcaaccgaacaggccgatgcccgctcgacgatg
actggccgaattgttgatagttacaccaatatcaccacggtgaaactcttcgcccatacg
gataaagaagctgattacgctaaagcgagtatgcgcagtttcctcgacacggtttatcgc
cagatgcgcctcgtcacagggatcagcgtcagtgtacaaatcattaactacttactcgcg
ttcagcattgccgccgtatcaatcacgctctggagtgacaatgctatctcggtgggtgca
attgcaattgcagtgagtttagcactgcgcctcaatgggatgtcgcagtggatcatgtgg
gaaatcagttcattatttgaaaatattggtacagtcaccgatgggatgaacaccctttcc
aagacaacactcattcaagactcgccagatgcaaacaccttagtagtggaacaaggtcgg
atcgattttaatcaggtgagctttcattatggtgaaaatactggcgtaatcgacgaactc
aacctcacgatcaaagcgggcgaaaaagtcggtctagttggccgctcgggcgcgggtaag
tctaccttagtcaatctgttaatgcgcttttacgatgttgagaaaggccaaatttgtatc
gatggacaagacattaagtccgtcaaacaggattcgctacgttcacagattggtatggtc
acccaagacacttccctactgcaccgcacgattcgtgaaaatattctgtacggcaatcca
ggggcgagcgaaacccaactcgaacatgcgattaaacaagctcaggcccatgattttatt
aatgaactaaccgaccctaatggcaatcatggtttagatgcacaagtcggtgaacgcggc
gtgaaactctctggcggacaaagacaacgtatcgcgattgctagggtgctattaaaaaat
gcccctattttactgctcgatgaggccacttctgccttggactctgaagttgaagctgcg
attcaagaaagcttgtacgaattgatgcagggcaaaaccgtaattgcaatcgcccatcga
ttatcgactattgccgcaatggatagattaatcgtgcttgatcaaggtcggattgttgaa
caaggaacccatcaagagctgattgctgctggcggtatctatgcccagttatgggctcac
caaactggcggatttttaggggttgaatag
DBGET
integrated database retrieval system
