Shewanella sp. FDAARGOS_354: CEQ32_01490
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Entry
CEQ32_01490 CDS
T04944
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
shf
Shewanella sp. FDAARGOS_354
Brite
KEGG Orthology (KO) [BR:
shf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
shf03016
]
CEQ32_01490
Enzymes [BR:
shf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
CEQ32_01490
Transfer RNA biogenesis [BR:
shf03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CEQ32_01490
Prokaryotic type
CEQ32_01490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
ArgoL1
Motif
Other DBs
NCBI-ProteinID:
ASF13835
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All DBs
Position
301734..302519
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AA seq
261 aa
AA seq
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MRIALGIEYDGSGYFGWQRQAEVDSVQGQLEQALSKVANEPISLFCAGRTDAGVHATGQV
VHFDTNAVRNEGAWTLGVNANLPDNIAVRWVKEVDESFHARFSATARRYRYVIYNHNLRP
GILRHGVSHYHGDIDVDKMHIAAQALLGEQDFTSFRAIQCQSKTPFRNVHSVKVTRQGMY
VIVDISANAFLHHMVRNIVGSLLEIGLGNQPLTWMADLLSLKDRNQAAATAKSNGLYLVD
VTYPEQYQLPKLALGPLFMLD
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgcggattgcattaggtattgaatatgacggcagtggctattttggttggcagcgtcag
gccgaagtcgattcagtacaagggcaattagaacaagccttgtctaaggtggcaaacgag
cccattagcttgttttgtgcaggaagaaccgatgctggtgttcatgcaacggggcaggta
gtgcattttgataccaacgccgtacgtaacgaaggtgcctggaccttaggtgttaatgcc
aatttacccgataatattgccgtacgctgggtaaaagaggtagatgagagcttccatgcc
cgcttttcggccacggctagacgttaccgctatgtgatttacaatcataatcttcgccca
gggatcctacgccacggcgtcagccattatcatggtgatatcgacgttgataaaatgcat
attgcggcgcaggcgctgctcggcgagcaggattttaccagttttcgtgctattcaatgt
caatctaaaaccccgtttcgcaatgtgcacagcgttaaagtgacgcgtcaaggcatgtat
gtgatcgtcgatatatctgccaacgcctttttgcaccatatggtgcgtaatattgtcggt
tcgctgctggagattgggcttggcaaccagccattgacctggatggcggatctgttgtca
ctaaaagatagaaatcaagccgcggcaacggctaaatcgaacggactttatcttgtggat
gtgacatatccggagcaatatcaattgccaaagttagcgcttgggccattgtttatgttg
gattaa
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