Shewanella sp. FDAARGOS_354: CEQ32_02180
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Entry
CEQ32_02180 CDS
T04944
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
shf
Shewanella sp. FDAARGOS_354
Pathway
shf03030
DNA replication
shf03430
Mismatch repair
shf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
shf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CEQ32_02180
03430 Mismatch repair
CEQ32_02180
03440 Homologous recombination
CEQ32_02180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shf03032
]
CEQ32_02180
03400 DNA repair and recombination proteins [BR:
shf03400
]
CEQ32_02180
Enzymes [BR:
shf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CEQ32_02180
DNA replication proteins [BR:
shf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CEQ32_02180
DNA repair and recombination proteins [BR:
shf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CEQ32_02180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
CAF1
Motif
Other DBs
NCBI-ProteinID:
ASF13960
LinkDB
All DBs
Position
470291..470968
Genome browser
AA seq
225 aa
AA seq
DB search
MGAWLINAKLQWRALRCQHQLFKDYYQSLIPLMALPINRAPLMAMDLEMTGLDPLQDQIL
SIGLVPIENGVIPLGEAQQKLVQIKGSVGQSATIHGILDNHLIQAVSIEEAMAWFITQTR
GRVLVAHHSPLDCRFLQQDILAIYHQAVLLPAIDTLVLEKQRLLREHSVLKEGSLRLGAC
RERYHLPIYGAHSALTDALACAELLLAQVAAMGGGADISVGDLLT
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atgggcgcttggttgattaatgctaagttgcaatggcgagcactgcgctgtcagcatcaa
ttatttaaggattattatcagtccttaatcccgctgatggcgctgcccatcaatcgtgct
cccttgatggcgatggatttggagatgacagggttagatccccttcaggatcaaatctta
agcattggcttagtccccattgaaaatggagtgatcccccttggtgaggcgcagcaaaaa
ttagtgcaaattaagggcagtgtcggccaaagtgcgacgattcatgggattctcgacaac
catttaatccaagcggtgagcattgaggaggctatggcatggtttattactcaaacccgt
ggccgagtattagttgcccatcactccccactggattgtcgttttttacaacaagatata
ttggctatctaccatcaagccgttttactccccgctatagataccttagtacttgagaaa
caacggttattacgtgagcattcggtacttaaagaaggaagtctaaggcttggagcctgt
cgagagcgttatcacttaccgatttacggtgcccatagtgcattaaccgatgcattagcc
tgtgcggagttattattagcacaagtggcggccatggggggaggtgcagatatttcggtc
ggggatttactgacctaa
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