Shewanella sp. FDAARGOS_354: CEQ32_02275
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Entry
CEQ32_02275 CDS
T04944
Name
(GenBank) exonuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
shf
Shewanella sp. FDAARGOS_354
Brite
KEGG Orthology (KO) [BR:
shf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shf03400
]
CEQ32_02275
DNA repair and recombination proteins [BR:
shf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CEQ32_02275
Archaeal homologous recombinant proteins
CEQ32_02275
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Ortholog
Paralog
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
FBPase_2
CNOT1_1st
Motif
Other DBs
NCBI-ProteinID:
ASF13972
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All DBs
Position
488767..489966
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AA seq
399 aa
AA seq
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MRFIHTSDWHIGRQLHNQSLLDDQAYVLDQIVALAQQHSVDAVIIAGDIYDRSIPPASAV
ALLNDVLNRLINQLGIQVLMIAGNHDGHERLGFAAKQMAASGLHIIGPLQAELVPTRLTS
ASGDAYFYPLPYAEPATVRQVFETDAKGLSVSSHEEAMALLLEQVHSHDSQGLPKVVVSH
CFLDGGSESESERPLSIGGADKISPRLFSEFDYVALGHLHGPQYKGCEQVRYSGSILKYS
FSEQHQHKSVTLVDIAAQSPAQIQLLPLTALRDVRIMEGELAHLLEVGKTDAKREDYLMV
RLLDKHAILDAMGKLRSVYPNVLHLERTGLMAGDQAVVLNRDHIKKGEMAMFRDFFAQVS
GDELTPAQQAVMEDILTQLHRDGLERSETHRDVKEEQAE
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgcgatttattcacacctcagactggcatattggccgtcagttacataatcaatcatta
ctggatgatcaggcctatgtacttgatcaaattgttgcattggcgcagcagcacagtgtt
gatgcggtgattattgcgggggatatttacgatagatcgattccacccgccagtgccgtc
gctttgcttaatgatgtgcttaatcgccttattaaccaattgggtatacaagtgctgatg
attgctggcaatcacgatggccatgagcgtttgggatttgctgctaaacaaatggctgcc
agtggtttacatattattgggccgctacaggccgaattagtgcctactcgtttaaccagt
gccagtggcgatgcttacttttatccgctgccttacgccgaacctgcgaccgtgcgccaa
gtgtttgaaaccgatgccaaaggccttagcgtatcgagccatgaagaggcgatggcgtta
ttgttagaacaggtccactcccatgatagccaaggtttacctaaagtggtggtgagtcat
tgctttttggatggtggcagcgagtctgaatccgaacgtccattaagtatcggcggcgcg
gataaaatttccccacggctgtttagtgagtttgactatgtcgccctagggcatttgcat
ggcccgcaatataaaggctgcgaacaagtgcgctactcaggctcaatcctaaagtattcc
tttagtgagcaacaccagcataagtctgtcaccttagtggatatcgcagcgcaatctccc
gctcaaatccaactcttgcccttaactgcgctacgtgatgtgcggattatggaaggggaa
ttggcacatttattagaagtaggtaaaaccgatgccaagcgtgaggattatttaatggtg
cgcctgctcgataaacacgccattttagatgccatgggcaaactgcgcagtgtttatccc
aatgtgctgcatttagaacgcaccggattgatggcgggcgatcaggcggtggtgctcaat
cgagatcatataaaaaaaggtgaaatggccatgttccgtgacttttttgcccaagtctcg
ggggatgaattaacgccggcgcagcaggcggtaatggaggatatcctaactcagcttcat
cgagacgggctcgaacgcagcgaaacacatcgtgacgtaaaagaggagcaggcagaatga
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