KEGG   Shewanella sp. FDAARGOS_354: CEQ32_03480
Entry
CEQ32_03480       CDS       T04944                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
shf  Shewanella sp. FDAARGOS_354
Pathway
shf03030  DNA replication
shf03430  Mismatch repair
shf03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:shf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CEQ32_03480
   03430 Mismatch repair
    CEQ32_03480
   03440 Homologous recombination
    CEQ32_03480
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:shf03032]
    CEQ32_03480
   03400 DNA repair and recombination proteins [BR:shf03400]
    CEQ32_03480
Enzymes [BR:shf01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     CEQ32_03480
DNA replication proteins [BR:shf03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     CEQ32_03480
DNA repair and recombination proteins [BR:shf03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     CEQ32_03480
SSDB
Motif
Pfam: RNase_T Rv2179c-like RNase_H_2 DNA_pol_A_exo1 Pro_racemase
Other DBs
NCBI-ProteinID: ASF14184
LinkDB
Position
complement(754624..755262)
AA seq 212 aa
MPKTPAHSPANTLVVLDFETSGLSPSQGARAIEIGAVLIEQGQITARFSELMNPGFRINT
FIEDYTGISNQMLSRAAPCAEVMSRFAKFIGKHHLVAHNAAFDQRFLDAEFAQIGHQYSG
QFGCSLLLARRLYPEAINHQLATLVSYKQLPTEGTFHRALADAEMTGHLWLRMLADLKRD
FAIAEPPFSLMQKVMRKSKAEVPKFLRQYARG
NT seq 639 nt   +upstreamnt  +downstreamnt
atgcctaaaacacccgcccactcgcccgctaatacccttgtggtcctcgattttgaaacc
tcgggtctttcgcccagtcaaggtgctcgagctattgagattggggcggtattgattgaa
cagggccaaatcactgcgcgtttttcagaattaatgaatccaggttttcggataaacacc
tttattgaagattacaccgggatcagcaatcaaatgctgtcacgtgcagcgccctgcgcc
gaggtaatgtcacgatttgccaagtttatcggcaagcaccatttggttgcccataatgcc
gcattcgatcagcggtttcttgatgctgaatttgctcaaattggtcaccaatattccggc
cagtttggctgctctctcctgttggcaaggcgcttgtacccagaggcgattaatcatcaa
ctggcaacgttagtaagctataaacaactgccgaccgaggggacttttcaccgcgcgctt
gctgatgcggaaatgacgggacacttatggctacgaatgttagcggatctgaaacgggac
tttgcaatagccgaaccacccttcagtctaatgcaaaaagtgatgcgcaagagtaaagct
gaggtgcctaagtttctgcgtcaatatgccagaggttaa

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