Shewanella sp. FDAARGOS_354: CEQ32_05075
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Entry
CEQ32_05075 CDS
T04944
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
shf
Shewanella sp. FDAARGOS_354
Pathway
shf00730
Thiamine metabolism
shf01100
Metabolic pathways
shf01240
Biosynthesis of cofactors
Module
shf_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
shf00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
CEQ32_05075
Enzymes [BR:
shf01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
CEQ32_05075
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
ASF14457
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Position
complement(1109318..1111480)
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AA seq
720 aa
AA seq
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MSSLESSSESLAVNTHGQTNRRVARAEAQAFIDTLKPLQHPNSQKLYLQGSREDLRVGMR
QILQTDTRIGGTVIAPKVEKNPPIPVYDCAGPYSDPAAQINVRQGLAKLRLPWIIERQDT
EVLDCATSDFTQQRLKDDGLDHLRFEAGSSAIVRPRRALPGKRVSQLHYARQGIITPEME
YVAIRENMALAQVQDEILNRRGQGESFGAVIGKPITPEFVRDEIARGRAIIPLNINHPEA
EPMIIGRNFLVKVNANIGNSAVTSSIEEEVEKLVWSTRWGADTVMDLSTGRYIHETREWI
IRNSPVPIGTVPIYQALEKVNGVAEHLTWEVFRDTLIEQAEQGVDYFTIHAGVLLRYVPM
TAKRVTGIVSRGGSIMAKWCLSHHQENFLYTHFREICELCVAYDVSLSLGDGMRPGSIAD
ANDEAQFAELETLGELVKIAWEYDVQTIIEGPGHIPMQLIKENMDKQLIHCAEAPFYTLG
PQITDIAPGYDHFTSGIGAAMIAWYGCAMLCYVTPKEHLGLPNKQDVKQGLIAYKIAAHA
ADIAKGHPGAQIRDNALSKARFEFRWEDQYNLGLDPDTARAYHDESLPQESAKVAHFCSM
CGPKFCSMKITQDVRDYAASLAAGTLSVASSSQNVVSAEALASINPAQQGQSNTEAIQQI
RVKTQDELAVAMAQKSAEFAASGAKLYLPLGDANTAKTANEAAKHQDGAELKPTAQVAEV
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgtccagtttagaatcgtcctcagaatcacttgccgtgaacactcatgggcaaacgaac
cgccgtgtggcgcgcgccgaggcgcaagcctttatcgatacccttaaaccattacaacat
cctaattcgcaaaagttgtatttgcagggaagccgtgaggatctccgtgtagggatgcgg
caaattctgcaaaccgatacgcggattggcggcacggtgatcgcgcccaaagtcgagaaa
aatcctcccattccggtgtatgactgtgccggtccttattccgatcctgctgcgcaaatt
aacgtgcgccaaggtttagccaaactcagattaccgtggattatcgagcgccaagatacc
gaagtgctcgattgtgcaacctcagattttacccagcaacgcctaaaggatgatgggctc
gatcatctgcgtttcgaagccggctcaagtgcgattgttcgtcctcgccgcgccttaccg
ggtaaacgcgtgagccaattacactatgcgcgccaagggatcattacccctgaaatggaa
tatgtggcgattcgggaaaatatggcgctcgcccaggtgcaagatgaaatcttaaaccgc
cgcggccaaggtgaatcctttggcgccgtaataggtaaaccgataacccctgaatttgtc
cgcgatgaaattgcccgtggacgcgccattattccgttaaatatcaatcaccccgaagct
gagcctatgattattggccgtaactttttagtcaaagtgaacgccaatatcggtaactcg
gcggtcacgtcttccatcgaggaggaagtggaaaagctagtctggtcaacccgttggggc
gctgacactgtgatggacttgtccactggccggtatatccatgaaacccgagaatggatt
atccgcaactcgccagtgcctattggcacagtgccgatttatcaagcattggagaaagtg
aatggtgttgctgagcacctgacctgggaagtgtttcgcgatactttgattgagcaagcg
gagcagggcgtcgattactttaccatccacgcgggcgtgttattgcgctatgtgccgatg
accgccaaacgggtgactgggatcgtgtcccgcggcggctctattatggccaaatggtgc
ttgagccaccatcaagaaaacttcctctatacccatttccgtgagatttgcgagctgtgc
gttgcctacgatgtgtcgctgtcattaggcgatggtatgcgacctggctccattgccgat
gccaatgatgaggcgcagttcgccgagcttgagaccttaggcgagttggtcaaaatcgct
tgggaatacgatgtgcagaccattatcgaagggcctggacatatcccgatgcaacttatc
aaagagaatatggataagcagcttatccactgcgccgaggcgccgttttatactctaggg
ccgcaaattaccgatattgcgccgggttacgatcatttcacctcggggataggtgcggcg
atgatcgcatggtatggctgcgccatgctctgctatgtgacgccgaaagagcacttaggt
ttgcccaataagcaggacgtcaaacaagggctgattgcctacaagattgccgcccatgca
gccgatattgccaaaggccacccgggcgcgcagatccgcgacaatgcgttatctaaggcg
cgttttgaattccgttgggaagaccaatataacctgggacttgaccctgataccgcccga
gcctatcacgatgaatccctgccacaagagtcggccaaggtcgcgcatttttgctctatg
tgtggccctaagttctgctcaatgaagatcacccaagatgtgcgcgactatgcggcaagt
ttagcggcgggtacgttgtcagtggcttcgtcaagccaaaatgttgtgagcgctgaagcg
cttgcatcgataaaccctgctcaacaagggcaatcaaacacagaagcaatccagcagatc
agagtcaaaactcaagatgaattagcggtggccatggcgcaaaaatcggctgagtttgcg
gcctcgggcgccaaactgtatctgccgctgggcgatgctaatacagctaaaactgccaat
gaagcggcaaagcatcaggatggggcagagctcaaaccaacagcacaggttgcggaggtt
tga
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