Shewanella sp. FDAARGOS_354: CEQ32_05265
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Entry
CEQ32_05265 CDS
T04944
Name
(GenBank) transcriptional regulator HexR
KO
K19337
RpiR family transcriptional regulator, carbohydrate utilization regulator
Organism
shf
Shewanella sp. FDAARGOS_354
Brite
KEGG Orthology (KO) [BR:
shf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shf03000
]
CEQ32_05265
Transcription factors [BR:
shf03000
]
Prokaryotic type
Helix-turn-helix
Other families
CEQ32_05265
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_6
SIS
SIS_2
HTH_Tnp_ISL3
MarR
HTH_29
HTH_24
Penicillinase_R
HTH_Crp_2
DUF3640
Motif
Other DBs
NCBI-ProteinID:
ASF14489
LinkDB
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Position
1156267..1157121
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AA seq
284 aa
AA seq
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MNTLEKVQKSLTHFSKSERKVAEVILASPQTAIHSSIATLAKMADVSEPTVNRFCRRLDT
KGFPDFKLHLAQSLANGTPYVSRHVEEDDSPESYTTKIFESSMASLDTARQSLDVAAINK
AVDILTQAKTISFFGLGASASVAHDAQNKFFRFNVPVICFDDVLMQRMSCINSNEGDVVV
LISHTGRTKSLIEIARLARENGAAVIGITARNSPLSMECTLPVTMEVPEDTDMYLPMASR
LAQLVTIDVLATGFTLRRGPRFRDNLKRVKEVLKESRINKDPIL
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgaataccctagaaaaggttcaaaaaagcctcacccattttagtaagtcagaacgcaag
gttgcagaggtcatcttagcctctccgcaaacagctattcactccagtatcgccacactc
gctaagatggcagatgtcagtgaacctactgtgaaccgtttctgtcgccgcttagatact
aaaggctttcctgattttaagttacatctggcacaaagtctcgcaaacggcacgccttat
gtgagtcgccatgttgaagaagatgattctcccgaatcatacacaacaaaaatattcgaa
tcttcaatggcttctttagatactgcccgtcaaagtttagacgtagcggccatcaataaa
gccgttgatattctgactcaggccaagacaatttcattctttggcttaggggcatcagcc
tcagtcgcccatgacgcacaaaataaatttttccgttttaatgtgcctgtcatctgtttt
gacgatgttctgatgcaacgcatgagttgtatcaacagcaatgaaggcgatgttgtggtt
ttaatttcccacacaggccgcactaagtcattgattgaaatagcacgtttagcaagagaa
aacggcgctgccgttattggtattacggctcgtaactcgccgttatcgatggaatgtaca
ctgcctgtgacgatggaggtgccagaggatacagatatgtatttacctatggcctcgcgt
ttagcgcaattggtgactatagatgtattggcgacgggttttaccctacgccgcggccct
cgtttccgtgataatttaaaacgggtaaaagaagtgttgaaagagtctcgtatcaataaa
gatccgatactgtaa
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