Shewanella sp. FDAARGOS_354: CEQ32_05645
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Entry
CEQ32_05645 CDS
T04944
Name
(GenBank) DNA-binding response regulator
KO
K07666
two-component system, OmpR family, response regulator QseB
Organism
shf
Shewanella sp. FDAARGOS_354
Pathway
shf02020
Two-component system
shf02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
shf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CEQ32_05645
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CEQ32_05645
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
shf02022
]
CEQ32_05645
Two-component system [BR:
shf02022
]
OmpR family
QseC-QseB (quorum sensing)
CEQ32_05645
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Response_reg
Trans_reg_C
Motif
Other DBs
NCBI-ProteinID:
ASF14545
LinkDB
All DBs
Position
complement(1239367..1240026)
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AA seq
219 aa
AA seq
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MRIMLVEDNELLAQGICLNLAKMGMQVDHLSSYQQALVGIKNETFSAIVLDLGLPDGNGK
ELLKTWRSQGVSIPTIVLTANTDFDTKLECLDVGADDYLGKPFDVRELAARIRAIVRRQY
GLDHNSLNIGALSIDLNTREVIFRDQNVPLSRREFQLLLELAQSAGRVLTRNQLEQLTYG
WDEVGSNSIEVHIHHLRKKLANELIKTVRGIGYTLTELN
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atgcgtatcatgttagtggaagataatgaattactggcccagggaatttgcctcaacctt
gccaaaatgggcatgcaggtggatcacttaagtagctatcagcaggcgttagtgggaata
aaaaatgaaacctttagcgctattgtgcttgatttaggtcttcccgacggtaatggtaaa
gaactccttaaaacatggcgttcgcagggggtatcgattcccaccatagtgctgaccgcg
aataccgattttgatactaaattggagtgcctagatgtcggagccgacgattatttaggt
aagcccttcgatgtgcgtgagttagcggcacgtataagggcaattgtgcgccgtcaatat
ggtctagaccataacagtttaaatattggtgcattaagcattgatctcaacacgcgagaa
gtgatttttcgcgatcaaaatgtgcccctttcacgcagagaatttcaattattactcgaa
cttgctcagtcggctggtcgagtgttaacccgtaatcagctggaacagctcacctatggc
tgggatgaggtgggcagtaattcaatcgaagtccatattcatcatttacgtaaaaaatta
gctaatgagttaattaagaccgtgcgcggaattggctacacccttacggaactgaattag
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