Shewanella sp. FDAARGOS_354: CEQ32_06220
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Entry
CEQ32_06220 CDS
T04944
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
shf
Shewanella sp. FDAARGOS_354
Pathway
shf03030
DNA replication
shf03430
Mismatch repair
shf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
shf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CEQ32_06220
03430 Mismatch repair
CEQ32_06220
03440 Homologous recombination
CEQ32_06220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
shf03032
]
CEQ32_06220
03400 DNA repair and recombination proteins [BR:
shf03400
]
CEQ32_06220
Enzymes [BR:
shf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CEQ32_06220
DNA replication proteins [BR:
shf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CEQ32_06220
DNA repair and recombination proteins [BR:
shf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CEQ32_06220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNA_pol3_tau_5
DNAX_ATPase_lid
AAA
AAA_22
RuvB_N
AAA_5
AAA_16
AAA_14
PIF1
AAA_18
ResIII
TsaE
AAA_2
AAA_assoc_2
RCF1-5-like_lid
AAA_7
Adeno_E1B_55K_N
Motif
Other DBs
NCBI-ProteinID:
ASF14637
LinkDB
All DBs
Position
complement(1372485..1375538)
Genome browser
AA seq
1017 aa
AA seq
DB search
MSYQVLARKWRPATFEQMVGQSHVLHALTNALTQQRLHHAYLFTGTRGVGKTSLARLFAK
GLNCEKGVTASPCGVCGSCVEIAQGRFVDLIEVDAASRTKVDDTRELLDNVQYRPTRGRF
KVYLIDEVHMLSRSSFNALLKTLEEPPEHVKFLLATTDPQKLPVTVLSRCLQFNLKSLTQ
QEIGTQLQHILTQEQLPFEHEALTLLAKAANGSMRDALSLTDQAIAFGGGTVMLNQVQSM
LGSIDEQHVLGLLKALTDANIGVLMQSCAQVLAYGADAQEVLRSLLELLHQITLTQFAPA
AAQQSLYSAQIQAFAEQLAPEQVQLYYQILLTGRKDLPHAPDPKSGLEMALLRAVAFVPE
KPVKRWQVEDTAKVSLPSQQPMSATPTSNMPAVEQTVNQAVAEKKTSLTSAVDSLALPQV
AATSALATASLVEASQQALSDEDAVDEALALNAALIAEQQVILSQAQSQGFGANVDVVSN
TETEVSAVSMPASNTDAEHHQAAVVDTASVNLKPYANQLTEPTVALSNENDVEEETQTSV
NESVDKLTPDAYSAESYGQYDYAAAPLDAYQDDYAQFISEEQGAFSDIEDNSFNRDSAQS
IDHSHVVHESAVHGHAAQASATPAQKSQSIAESSASTSPLASTTPPASTTVSLDDDDILS
AVLAARDSLLSDLDALSTKDGDGKKLAAEVKVNPPSQNGHTAPVSHAPTHKTPSVDASIE
RQVVSNESDNDFELPFDDDFEAEIHLESLSNVTPTPQFDPNDRPPWEEAPVVATDEASPL
AASSHLQSGVSAPQKSVGAAVSGHASAQTSTIDTEVEEIKTDLQRTEANTVLQPSQTQEL
SQTQQRTQQSPPSETVSSASFTALALAQSITGHPLDLHWYKLMASLDIGGRVRQLAVNSI
CQQQANPLPLLLKPDQKHLAAQVAIEQLEQALTAALGNPRQVEVVIGTDPTRETPLEMRK
RFHQELLQQAQQSLIMDDNVQWLINRFGAELEKDSLLYPPELLNQRSGLIPALPEPE
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atgtcatatcaggtgttagccagaaaatggcgccctgccacattcgaacagatggtcggc
caaagtcatgtgttgcacgcattaaccaatgcgttaacccagcaacgtttacaccatgcg
tatctttttactggcacgcgcggagtgggcaagaccagtttggcgcgtctctttgccaaa
ggtcttaactgtgagaagggcgtaacggcttccccctgtggtgtgtgtggcagctgtgtt
gaaattgcccaaggccgttttgttgacttaattgaagtcgatgccgcctcgcgcactaaa
gtcgatgacactcgtgaactcttagataatgtgcaatatcgtccgacccgaggccgtttt
aaggtttatctgatcgacgaagtacacatgctctcacgcagtagttttaatgcgctgcta
aaaacccttgaagaaccgccagagcatgtgaagtttttgctggcgaccaccgatccgcaa
aagctgccggtgactgtgttatcccgctgtttgcaatttaatttaaagagtttaacccag
caggaaattggcactcagctacagcatattttaacccaagagcaattgccctttgagcac
gaagccctaactctgctcgccaaagcggccaatggcagcatgcgtgatgctttaagcttg
accgatcaggccatcgccttcggtggcggcacggtaatgctcaaccaagtgcaatctatg
ctgggcagcatcgatgagcagcatgtgctgggcttacttaaagccttaaccgatgccaat
attggcgtattgatgcaaagctgcgcccaggtgctcgcctatggcgcggacgcccaagaa
gtgctgcgtagtttactggaattactgcatcagattaccctgacacaatttgcgccagcc
gccgcgcagcaatccctttatagtgctcaaattcaggcctttgccgagcagttagcgcct
gaacaagtgcagctgtattaccaaattttactgactggccgtaaagacttaccccatgcg
ccggatcctaaatcgggcctcgaaatggcgctgctgcgagcggtggcatttgttcccgaa
aagccagtaaaacgttggcaagtcgaagacacagctaaggtaagtttgccttctcagcag
ccaatgtctgcgacgcccacatcaaatatgcccgcggtagaacagacggttaatcaggct
gtggctgaaaaaaaaacttcgctaacttccgccgttgattccctagctttgccacaagtt
gcagcaacgtctgcgcttgctacggcttcactcgtcgaagcatcgcaacaagctttatcc
gatgaggatgcggttgatgaagcgttagcactcaatgccgcattgattgccgagcagcaa
gtgattttaagtcaagcccaaagtcagggctttggcgcaaatgtggatgttgtatcgaat
actgagacagaagtaagtgctgtttctatgcctgcatcaaatactgatgctgaacatcat
caagccgcggttgttgataccgctagtgttaaccttaagccttacgccaaccagttaaca
gaacctacagtggcattatctaatgaaaatgatgtcgaggaagagactcaaacgagtgtt
aacgaaagtgtagataagttaacgcctgatgcttattcagctgagtcttacgggcaatac
gattatgccgccgcgccgctggatgcttatcaagatgattatgcgcaatttatatctgag
gagcagggcgcattctctgatatagaagataattcgtttaatcgcgacagtgctcagtct
attgatcatagtcatgttgtgcatgagtccgctgttcatggacatgccgctcaagcgtct
gcgacaccagcgcaaaagtcgcagtctattgccgaaagctctgcttcaacaagccctctg
gcttcaacaactcctccggcttcaactacagtatccctcgatgatgacgatattttatcg
gcggtattagcggcgcgcgactccttactatccgatctcgatgcgctcagcaccaaggat
ggtgatggaaaaaagctggcagcggaagttaaggttaaccccccgagtcagaatggccat
actgcgccagtctctcacgcgccaacacataaaacgccttcagttgatgcatctattgag
cggcaagttgtcagtaacgagtccgataacgactttgagctgccctttgacgacgatttc
gaggccgagatccatcttgagtcactatccaatgtcacgccgactccgcagtttgatcca
aacgatcgcccgccatgggaagaggcacccgtcgttgcaacggatgaggcaagcccattg
gctgctagctcacacctacaaagtggtgtgagcgcgccgcaaaaatcagttggtgcggca
gtatctgggcatgcttcggctcaaacctcgacaatcgataccgaagtggaagagattaag
actgatctgcaacgcactgaagcaaataccgtgctgcaaccgtctcagacacaggaatta
tcacagacgcagcaacggacccaacagtcaccgccaagcgagacggtttcatcggcgtca
ttcaccgcattagcactggcgcaatcgattaccggtcatccgctcgatttgcattggtac
aagctcatggcgagcctcgatattggcggtcgtgtgcgtcagttagcggtcaattcgatt
tgtcagcagcaggctaaccccttgccattactgctaaaacccgatcagaaacacttggcg
gcgcaggtggccattgagcagctcgagcaagccttaaccgcagcccttgggaacccaagg
caggttgaggtggtcataggaaccgatcctacgcgggagacgcccttagagatgcgcaaa
cgttttcaccaagagttactgcaacaggcgcagcagtcgctaataatggatgacaatgtg
caatggctgattaaccgctttggggctgagcttgagaaggatagcttgctctatccgcct
gaactgttaaatcagcgcagcgggcttattcctgcgttacctgagcccgagtaa
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