Shewanella sp. FDAARGOS_354: CEQ32_06255
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Entry
CEQ32_06255 CDS
T04944
Name
(GenBank) tRNA dihydrouridine(16) synthase DusC
KO
K05541
tRNA-dihydrouridine synthase C [EC:1.-.-.-]
Organism
shf
Shewanella sp. FDAARGOS_354
Brite
KEGG Orthology (KO) [BR:
shf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
shf03016
]
CEQ32_06255
Transfer RNA biogenesis [BR:
shf03016
]
Prokaryotic type
tRNA modification factors
Dihydorouridine synthases
CEQ32_06255
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Gene cluster
GFIT
Motif
Pfam:
Dus
FMN_dh
Oxidored_FMN
NAGLU_C
His_biosynth
BKACE
Motif
Other DBs
NCBI-ProteinID:
ASF14644
LinkDB
All DBs
Position
1379515..1380462
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AA seq
315 aa
AA seq
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MRVILAPMEGVVDDLMRDILSSINPYDLLVTEFVRVVDQLLPEKVFLKLCPELLSGGYTP
SGTPVRVQLLGQEPHCMAENAMRAIELGSHGVDANFGCPAKMVNRSNGGAVLLQYPNTIH
DIVRAMRQAVPAEHPVTAKIRLGYEDKSLFMENALAVYEAGATELAIHARSKVDGYKPPA
YWEYITEVRKRLPIPVIANGEIWNSEDAKRCMEVTGCDSIMIGRGAISLPNLADTIKTGA
TPYSWADTLQLMLSYTQRELSGRKSDYYPARIKQWFSYLNRQYPEADTLFRELRIYKTTE
DIVRVLEQAQQHLSQ
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
gtgcgggtaattttggctccgatggaaggcgtggttgatgacttaatgcgagatattttg
tcgtcgattaacccttacgatttgcttgtcaccgaatttgtgcgcgtcgttgaccaacta
ttacctgaaaaggtctttcttaaactctgtccagagctactgagcggtggctatacgcca
tcgggtaccccagtccgcgtacagcttttaggccaagaacctcattgcatggccgaaaac
gccatgcgcgcaattgagcttggctcccacggcgtagatgcaaactttggctgtcctgcc
aagatggtcaatcgcagtaatggcggcgcggtgttgctgcaataccctaatacgattcac
gatattgtgcgcgccatgcgccaagcagtgcccgctgagcatccggtgacagccaagatc
cgtttaggctacgaagacaaatccctgtttatggaaaatgcgctggccgtttatgaagcg
ggcgcaacagagcttgctatccatgcccgcagtaaggttgatggttacaaaccgcccgct
tattgggaatacatcactgaagtgcgcaaacgtttgccaataccagtaattgccaacggt
gagatttggaatagtgaggacgctaaacgttgtatggaagtaacggggtgcgacagtatc
atgattggccgcggcgcgatctcgctccccaatcttgcagacaccataaaaaccggtgca
acgccctacagttgggctgacacgttacaattaatgctcagttatacccaaagggagctt
agtggccgtaagagtgattattatccagcgcgcattaagcagtggtttagttatctcaat
cgccaatatcccgaggcagataccctatttcgggaacttaggatctataaaactactgaa
gacattgtgcgtgtgctagaacaagcgcaacaacatctaagccagtaa
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