Shewanella sp. FDAARGOS_354: CEQ32_06790
Help
Entry
CEQ32_06790 CDS
T04944
Name
(GenBank) hydroxymethylglutaryl-CoA lyase
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
shf
Shewanella sp. FDAARGOS_354
Pathway
shf00280
Valine, leucine and isoleucine degradation
shf00650
Butanoate metabolism
shf00907
Pinene, camphor and geraniol degradation
shf01100
Metabolic pathways
shf01120
Microbial metabolism in diverse environments
shf04146
Peroxisome
Module
shf_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
shf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
CEQ32_06790
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
CEQ32_06790
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
CEQ32_06790
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
CEQ32_06790
Enzymes [BR:
shf01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
CEQ32_06790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMGL-like
Motif
Other DBs
NCBI-ProteinID:
ASF14739
LinkDB
All DBs
Position
1507805..1508752
Genome browser
AA seq
315 aa
AA seq
DB search
MSALDLSNLSATSLSASSDRVSLFEMGPRDGLQNEAAVPTQAKVALIESLANAGVKRIEA
GSFVSPKWVPQMADSGDVLRQIRRQAGVVYSALTPNVKGLELALDAKASEVAIFGAASQS
FSQRNINCSIEESIERFIPLMDMAKAANIPVRGYVSCVLGCPYEGEIAASEVARVSEILY
KMGCYEISLGDTIGVGTPLKARKMLQAVMERVPVEKLALHFHDTYGQALANITACLDLGV
RSFDASVAGLGGCPYAKGASGNLASEDLVYMLHGLGLKTGIDLEKLALAGFGISKQLNRL
NGSKVANAILQGAKA
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcgctggatctttcgaacttaagcgcgacctcgttaagcgccagctcggatagg
gttagcttattcgagatggggccacgtgatggcttgcagaatgaagccgccgtcccaaca
caggccaaagtcgccttgattgaatccctcgccaatgcgggcgtgaagcgaattgaagcc
ggcagttttgtgtcacccaaatgggtgccacaaatggccgatagcggtgacgtattgcgc
caaattcgccgtcaagcgggcgtggtttacagcgccctcacccccaatgtcaaaggctta
gagctggcgctggatgcaaaagcttccgaagtcgctatctttggtgcggcgtcacaaagc
tttagccaacgcaatatcaactgttcgattgaagagtcgattgaacgctttatcccgttg
atggacatggcaaaagccgccaatatcccagtgcgtggctatgtgtcctgcgttttaggc
tgcccctatgaaggggaaatcgcggcgagcgaagtggcaagagtgtctgaaatcctttac
aaaatgggctgttacgaaatttcgctcggcgacactatcggtgtaggcacgccgttaaaa
gcccgtaaaatgctgcaagccgtgatggagcgagtgccggtagaaaaactcgccctgcac
ttccacgacacctatggccaagcattagccaatattaccgcctgcctcgacttaggcgtg
cgcagctttgatgcctcagtggcaggcctaggtggttgcccgtatgcaaaaggcgcatcg
ggtaatctggcgagtgaagacttggtctatatgctccacggactcggtttgaagacgggt
atcgatttagaaaaactggcattagcgggttttgggatcagcaaacaattaaatcgtctt
aatggctctaaagtcgccaatgcaatcttgcagggcgctaaagcctag
DBGET
integrated database retrieval system